| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1390 |
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| Symbol | |
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| ID | 6115630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1745975 |
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| End bp | 1746994 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632878 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001759777 |
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| Protein GI | 170725751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00500551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCA GTAATAAAAA AATCATCCTT CACGATATGT GTTTACGGGA TGGTATGCAT
GCAAAGCGTC ATCAAATAAG TTTGGCTGAG ATGACTCAAC TGGCCACAGC CCTTGATGAT
GCAGGAGTGC CGCTCATAGA GGTCACCCAC GGCGATGGTT TGGGCGGTAA CTCAGTGAAT
TATGGATTTG CCGCCCACAG CGATGAAGAG TATCTCTCCA CCGTGATCCC TTTAATGAAA
CAGGCCAAGA TATCAGCCCT GCTGCTGCCA GGAATTGGCA CTGTCGATCA CCTTCGAATG
GCTCACGAGT TAGGCGTCAG CACGATACGT GTTGCAGCAC AATGCACAGA AGCGGATGTG
ACTGAGCAAC ATATTTCACT CTCACGTCAA CTGGGTTTAG ACACGGTGGG CTTTTTGATG
ATGGCCCATA TGCTTGAACC AAAAGCCCTG CTAGAGCAAG CCAAGTTGAT GGAAAGTTAC
GGTGCAAACT GTATCTACTG TACCGATTCA GCTGGATATA TGCTGCAAGA TGATGTGTTT
GAGCGTATCA GTGTACTGCG TGATGGCTTA AAGCCTGACA CTCAAATTGG CTTTCACGGT
CACCACAACT TAGCACTGGG TGTGGCTAAC TCACTCACCG CAGTCGAAGC AGGTGCTGAA
CGTATCGATG GTTCGGCAGC GGGGCTCGGT GCAGGAGCAG GCAACACGCC TCTTGAAGTA
TTTAACGCTG TCGCTACTCG CATGGGCGCA AGCACCGATG TCGATGTGTT TAAATTGATG
GCGGCGGCTG AGGAGATAGT GGTCCCCATG ATGGATCAAG CGATCCGAGT CGACCGCGAC
TCCTTAGTAC TAGGCTATGC AGGAGTTTAC TCCTCCTTCT TGCTTCACGC CAAAAGGGCT
GCAGAAAAAT ATGGTGTTCC CAGTGAAGCT ATTTTACTAA AACTGGGGCA GATGAAAACC
GTTGGTGGTC AGGAAGATAT GATTGAAGAT GTGGCCATTA ATCTAGCCAA GAGCCGCTAG
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| Protein sequence | MNISNKKIIL HDMCLRDGMH AKRHQISLAE MTQLATALDD AGVPLIEVTH GDGLGGNSVN
YGFAAHSDEE YLSTVIPLMK QAKISALLLP GIGTVDHLRM AHELGVSTIR VAAQCTEADV
TEQHISLSRQ LGLDTVGFLM MAHMLEPKAL LEQAKLMESY GANCIYCTDS AGYMLQDDVF
ERISVLRDGL KPDTQIGFHG HHNLALGVAN SLTAVEAGAE RIDGSAAGLG AGAGNTPLEV
FNAVATRMGA STDVDVFKLM AAAEEIVVPM MDQAIRVDRD SLVLGYAGVY SSFLLHAKRA
AEKYGVPSEA ILLKLGQMKT VGGQEDMIED VAINLAKSR
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