| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1386 |
|---|
| Symbol | nusB |
|---|
| ID | 6115626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1741690 |
|---|
| End bp | 1742094 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641632874 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_001759773 |
|---|
| Protein GI | 170725747 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000224744 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000173343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTT CTGAGCGCCG CAAGGCCCGC CGTTTAGCCG TTCAAGCCAT TTACTCTTGG
CAGTTAAGTG GAAATAACAT TGCTGATGTT GAGCATGAGT TTCTAACTGA GCAGAAGATT
GATGGTATCG ATGTAACTTA CTTCCGTGAG CTACTATCGG GAACAGCGAC AAAACAGGCT
CAAATAGACG AGTTGATCAC ACCTCATATT GAGCGTCCTT ATGATGAGGT CTCTCCTATA
GAGAAAGCTG TGTTAAGACT GGCAACTTAT GAGCTTACAT TCCGTAAGGA TGTACCTTAT
AAAGTGGCAA TTAATGAGGC TATCGAACTA GCGAAAGCGT TCGGTGCCGA AGATGGCCAT
AAGTTCGTAA ATGGTATTCT CGACAAGATT GTAGGTCGTA AGTAA
|
|---|
| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNIADV EHEFLTEQKI DGIDVTYFRE LLSGTATKQA
QIDELITPHI ERPYDEVSPI EKAVLRLATY ELTFRKDVPY KVAINEAIEL AKAFGAEDGH
KFVNGILDKI VGRK
|
|---|
| |