| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1385 |
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| Symbol | ribH |
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| ID | 6115625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1741199 |
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| End bp | 1741681 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632873 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_001759772 |
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| Protein GI | 170725746 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000413465 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000169741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAACGTAG TTCAAGGTAA TATCGAGTCG AAAAATGCAA AGGTTGCTAT CGTAGTATCA
CGTTTTAACA GCTTTGTTGT TGAAAGTTTA CTTGAAGGTG CGGTCGATAC ACTGAAACGC
TTTGGTCAGG TTGCTGATGA GAACATCACA GTAATACGTG TACCTGGAGC GGTAGAGTTA
CCCTTGGCTG CACGTCGTGT TGCTGCTAGC GGTAAATTTG ATGGCATAAT TGCACTAGGT
GCAGTTATCC GTGGCGGTAC GCCACACTTT GATTTTGTTG CAGGTGAATG TAACAAAGGT
CTAGCTCAGG TTGCACTTGA GTTCGATCTT CCTGTTTCAT TTGGCGTTTT GACTACCGAT
ACCATAGAGC AAGCGATTGA ACGCTCAGGT ACTAAAGCGG GTAACAAGGG CGGTGAAGCT
GCACTTGGTC TGCTTGAAAT GGTCAACGTG CTGCAAGAAC TAGAACAGCA GTTGCAAGAT
TAG
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| Protein sequence | MNVVQGNIES KNAKVAIVVS RFNSFVVESL LEGAVDTLKR FGQVADENIT VIRVPGAVEL
PLAARRVAAS GKFDGIIALG AVIRGGTPHF DFVAGECNKG LAQVALEFDL PVSFGVLTTD
TIEQAIERSG TKAGNKGGEA ALGLLEMVNV LQELEQQLQD
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