| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1383 |
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| Symbol | |
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| ID | 6115623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1739252 |
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| End bp | 1739914 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632871 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001759770 |
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| Protein GI | 170725744 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00417649 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000386622 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTTACCG GGATCATTGA ATCAGTAGGT ACACTGCGCA AAATTGAACG TCGTGGTGAT
GATATTCGCC TTACCGTAGC CAGTGGAAAG TTAGACTTAG GTGATGTTCG CCTCGGTGAC
AGTATTGCCA CTAATGGCGT GTGTCTGACC GTTGTTGAGT GCATGAGTGA TGGCTATGTG
GCCGACATCT CAGCTGAAAC GGTGAGTTTA ACTGGTTTTG CTCACTATCA AGTTGGACGA
AAGGTTAACC TTGAGAAAGC GGTAACGCCA ACGACTCGTC TTGGTGGACA TATGGTCAGC
GGTCATGTCG ATGGTATCGC ATCGGTTGAT GACAGACAGC TTCGCGGTAA AGCGATTGAG
TTCTGGTTAA CCGCGCCAGC CGAGTTAGCT AGGTATATCG CTCATAAAGG CTCTATCACT
ATCGATGGGG TCAGTTTGAC CGTCAATGAA GTACAAGATA ACCGCTTTAG ATTGACCATA
GTGCCCCATA CTGCTGGTGA AACCACCTTA GTGGATATGA AGGCCGGTGA TACGGTAAAC
CTTGAGGTTG ATCTTATTGC CCGTCATCTG GAGCGTTTAA TGAGTTATGC CGGCGATAAA
GCACAAACAC CTGAGTCGAA CGTGACCATG GATCTGCTCG CTCGTTCAGG TTTTTTACGC
TAG
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| Protein sequence | MFTGIIESVG TLRKIERRGD DIRLTVASGK LDLGDVRLGD SIATNGVCLT VVECMSDGYV
ADISAETVSL TGFAHYQVGR KVNLEKAVTP TTRLGGHMVS GHVDGIASVD DRQLRGKAIE
FWLTAPAELA RYIAHKGSIT IDGVSLTVNE VQDNRFRLTI VPHTAGETTL VDMKAGDTVN
LEVDLIARHL ERLMSYAGDK AQTPESNVTM DLLARSGFLR
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