| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1379 |
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| Symbol | |
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| ID | 6115619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1734209 |
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| End bp | 1735873 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632867 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001759766 |
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| Protein GI | 170725740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.621698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000163615 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCAGT TTGTATACAG CATGCTTAGA GTGGGTAAGA TAGTCCCGCC TAAAAAGCAG
ATCCTTAAAG ATATCTCATT AAGCTTTTTC CCAGGCGCAA AAATTGGTGT TTTGGGTCTG
AACGGCTCAG GTAAGTCCAC CCTACTTCGC ATCATGGCCG GTATCGATAC CGAAATTGAG
GGTGAAGCGC GTCCAATGCA GGACCTTAAG ATAGGTTACC TGCCTCAAGA GCCTAAGCTT
GATGAGAACC AAACCGTTCG TGAAGCGATT GAAGAAGCAG TATCGGTAGC TAAAAATGCC
CTAACTCGTC TCGATGAAGT TTATGCACTT TACGCAGAAC CTGACGCTGA CTTTGATGCC
CTTGCCAAAG AGCAGGGACA ACTTGAAGCG ATCATTCAGT CACAAGATGC CCATAACCTA
GACAACATCC TAGAGCGCGC CGCTAATGCC CTGCGTCTTC CTGATTGGGA TGAAAAAATA
GCCGTATTAT CTGGTGGTGA GCGCCGCCGT GTGGCCATCT GTCGTCTGCT ACTCGAAAAG
CCTGACATGC TGCTTCTCGA TGAGCCTACC AACCACTTGG ACGCTGAGTC TGTTGCTTGG
CTAGAACGCT TTTTACAAGA CTACACTGGC ACCGTTGTGG CAATTACCCA CGATAGATAC
TTCCTCGACA ACGCCGCGGG TTGGATCTTA GAACTCGACC GTGGTGAAGG TATTCCATGG
GAGGGTAACT ACTCCTCTTG GCTTGAGCAG AAAGATGCTC GTCTGCAACA GGAATCAGCC
ACAGAAAGCG CTCGTCAAAA GACTATTGCC AAGGAGCTTG AGTGGGTACG TCAAGGCTCA
AAAGGACGTC AGTCTAAAGG TAAAGCGCGT ATGGCTCGCT TTGAAGAGCT CAATACAAAT
GATTACCAAA AGCGTAACGA AACCAATGAG CTGTTCATTC CACCTGGACC ACGTTTAGGT
GACAAGGTTA TCGAGATTAA TAACCTGACT AAATCCTATG GCGATCGCGT ACTTATCGAT
GACTTAAGCT TTACTGTCCC TAAAGGGGCT ATCGTCGGTA TTATCGGTGC CAACGGTGCG
GGTAAATCAA CCCTGTTCAA GATGATCTCA GGTGCAGAGC AGCCAGATAG CGGCACAGTT
GAACTCGGTG AATCTGTACA GATTGCCTCG GTTGAGCAGT TCCGTGATTC GATGAACGAT
AAGAACACGG TATGGCAGGA GATCTCAGGT GGGCAGGATA TTATGCGCAT CAACAACACT
GAGATCCCAT CTCGTGCCTA CGTGGGACGT TTTAACTTCC GCGGTGGCGA TCAGCAGAAG
ATCATCGGCA CCCTATCGGG CGGTGAGCGT AACCGAGTTC ATTTAGCAAA ACTGCTGCAA
GCTGGCGGTA ACGTGTTGCT ACTCGATGAG CCAACCAACG ACTTGGACGT TGAAACTCTA
CGTGCACTGG AAGAGGCTCT ACTTGAGTTC CCAGGTTGTG CCATGGTTAT CTCTCACGAT
CGTTGGTTCC TCGATAGAAT CGCCACCCAC ATTCTTGACT ACCGCGATGA GGGTAAAGTG
AACTTCTACG AAGGCAACTA CACCGAATAC TCAACTTGGT TAAAAGAGAC CTATGGTACT
GATGTGGTTG AGCCACATCG TCTTAAGTAC AAGCGTATGA GCTAG
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| Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGIDTEIE
GEARPMQDLK IGYLPQEPKL DENQTVREAI EEAVSVAKNA LTRLDEVYAL YAEPDADFDA
LAKEQGQLEA IIQSQDAHNL DNILERAANA LRLPDWDEKI AVLSGGERRR VAICRLLLEK
PDMLLLDEPT NHLDAESVAW LERFLQDYTG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDARLQQESA TESARQKTIA KELEWVRQGS KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEINNLT KSYGDRVLID DLSFTVPKGA IVGIIGANGA
GKSTLFKMIS GAEQPDSGTV ELGESVQIAS VEQFRDSMND KNTVWQEISG GQDIMRINNT
EIPSRAYVGR FNFRGGDQQK IIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEALLEF PGCAMVISHD RWFLDRIATH ILDYRDEGKV NFYEGNYTEY STWLKETYGT
DVVEPHRLKY KRMS
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