| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1367 |
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| Symbol | |
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| ID | 6115607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1721248 |
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| End bp | 1724886 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632855 |
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| Product | undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001759754 |
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| Protein GI | 170725728 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00142333 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATTT TTGCCCCTGA ATTGACTGCA ATTTGTGGTC AGGTTTGTAG CCGTTTAACT
GCTATTGGTC GGTCAACTTT TTCCTATCGT CGATTTAGAC TTTCATCTTT TTTGATCAGC
TCTTCTGCTA TTTATATTCT GTTTCCGCAC TCTATCTTAG CCGATGATAC TGAACTCTAT
GTGCATGAAG CATCTGCACG TAGTGGGGCT CGGCCGCAGA TGCTGATAAT CTTTGATAAC
TCCGGCAGTA TGAATACAAC GGTTGTTGGA GCTGAAAAAC CTTATTCATC AAATGCCGGT
GGTATAAGCG GCGATAACTT AGGCAAGCAA AACAAGCTCT ACTTCACCAG GGGGGCCACG
GCCGCAGAAG ATCAACCTAA CCCCTCCAAC ACATCAGAAA CACGTCACTT TTCTGGAGTG
ATCAATAGTT GTGAGAGCTC TTGGGAATCA CTGCATGAAT ATGGTTTTTA TACTGGCTAT
TTCAGAGGTT ACTCATTTAC AGGCTCTGAA GGAACCTGGA AGGAGCTCGA TGATACCGGC
ACTGAGGGGG TGATTGGTAT CGACTGTTTT GAAGATATAC AGGATGAAAA ATGGGCCAAT
GCAGTGGGAG TGACAAGTGG TTTACCTGTC GATGGGCGTG GCTCTAGCTC TCAACCGAGA
TTTTATACCT ACGCTAATGG GAGCTCTACT GAAGCAACTA AGCAGCGGGC GCGCGAACGA
GCTGAGCTGA CTGGATTTGG CACAGGTCGC CCTTTGACTA TCTATACTCA AGACTACCTT
ACTTGGCAAC ATGGTACTAA AGAGAAGGCG AATATCAGCC GTTTAGAGAT CGCAAAGAAT
GCGGTTAAAA GTATCATTTT AACCACACCG AGTGTCGATT TTGGCTTAGC GGTGTTTAAT
GTTAACGCGT GGAATGAGTT TGAGCGTGAT GGCGGGAGGA TTATCTCTGG TCTAAAGGAG
AATACCTCTG GGGTAAAGTC AGACTTGATT GAAGTTATTG GCGATATTCA AGGTAAAACG
AATACCCCTC TTTGTGAAAC ACTGTATGAA GCTTATCGCT ATTTTTCTGG ATTAAGTGTC
GACTTCGCCT ACAAAAATAC TGACCTACCA GGAGCGGGTT ATTACGTAAG TCAGCAACCT
CAAATGGATG CTTCTGTGGC TAAAAGTGGC ATTTACGAAT CGCCATTTAA AAAGTGTCAG
AATAACGCCA GCGTGGTGAT TATTACTGAT GGTGTGCCGA CTAAAGATGC TGCTGCAAAT
GGTTTCATTG ACACATTAAC CGGAGGAGCT GATAAATACG GCAGTGCAGC GACAGGAGAT
CTCAACTATC TAAGCGCGAT GTCAAGCTGG ATGAATAAGT ATGATCTTAA TACCAGTGAA
CCGGGCGAGC AAACCGTTAG CACTCATACG ATAGGTTTTA GTAAAGGGGC TGCTAGTGCG
GCAGCACTTT TGAAGAAAAC TGCTGAAGTA GGCGGAGGAC GCTATTTTGA TGCCACCAAT
GCTAACCTGT TACAGGGCTC ACTGCAGCAA GTGGTCAGTG AAGCGTTAGA TACTAACTCT
AGTTTTACTT CGCCGGCGGT TGCGAGTAAT AACTTCAACC GAACTCAATC ATTTGAGTAT
GCTTACTACT CCATATTCTT GCCCAATAAG GGGCCTACTT GGCTTGGAAA CCTTAAGAAG
TACAGAGTGA CAGGAAAGGG GGAAGTGGTC GATAAAGCCG GAAACCCTGC CATTGGTCTT
GATGGAAATA TTAAGTCCAC AGCTTGCTCT TTCTGGACAC CTTCTGCTGT ATGTAGTGCT
GGTGGTGATG GTAATGAAGT TGAGAAAGGC GGAGCCCTGT CTGCGATGCA GGCGGCTGAT
TCTAGAACCA TCTATAGTAA TTTAAACACT GGATTAACTG AGCTGACCGT TAACAATGTC
ACTAGTACTG CGGGAGGAAC CGAAAACTTA GTTAACTACC TAGGCGTTGC TGAAGAACAG
TTCCCCTCTC TTTTTGGTTG GGCAATGGGC TTAGATGTCG ATAACAATAA AGGGCTGGAG
AGCATTCCTA ATCCAGCAAC TAATTGGCGC GATGACATTA TGGGGGATGC CCTTCATTCA
AAACCACTAG CACTTAACTT TGGTACAAAG TCGACGCCTG ATGTGCGTAT TGTGATGGGG
ACTAACCATG GTTTTCTGCA TATGTTTAAA GATGATAGTA GCAGTAACAG CGTGACTGAA
AATTGGGCTT TTATTCCTTA TGAACTTCTA CCAAATCTAA AAACTCTTAG GGCGAATGTG
CCCACAGGTG TTCACTCTGT TTATGGCGTT GACGGTTCTC CTGTGGCCTA CACCGAAAGT
AATGACTCAG GTATAGAGAA GGCATGGCTC TTCTTTGGCA TGCGCCGAGG CGGCAGTAGT
TACTATGCTA TTGATATCAG TAATCCCGAT AATCCAAGCT TTATGTGGAA AGTGGATGCC
AGCTCGCCGG GTATGTCTGA ATTGGGTCAG TCATGGTCTA CTCCTGTCGT CACAACCATT
CCAGGTCGAA GCAGTGAGAG TCCCGTGCTT ATTTTTGGTG CGGGTTACTC GCCGTCGGGT
AAAGATGGTG CGGGTATTGG AGCCGATGAT GTTAAAGGTC GCGGGGTCTT TATTCTTGAT
GCTGAAACCG GTGCATTGGT GCATCAGTTT GGCTCTGCCA GTACAGGAGG AACACAACTT
CCAGGGATCT CAGACAGTAT TCCAAGCTCA GTTGCTGTAT TAGACTCCAA TGCTGATGGG
GCAACCGATC GTATTTATGC GACAGATACA GGCGGTAATG TATGGCGTAT GGATATGCCA
TCTGCAGATA CAAATAAGTG GTCTGGGTTT AAATTTGCCA GTTTAGGTGG TGGTGTTCAA
TCTTCTGACA GACGTTTCTA CTCAGCTCCC GCCGTGGCAC AAACCGTCAT CACCAATATT
GCCGAGGTGA CTGTCGAGAA CGGTGGAACA ACAACCAAAA CAAAAACCAA GCTTAACATC
CCCTATGATG CCGTGGTGGT AGGTAGCGGA CACAGAGCAA TGCCATCAGA TTTGAGCCGC
TCAGATATGT TCTTTACCCT GCAGGATAGA AATGTGGTGA GTCGCTCCTT TAAAGGTGGG
GGGAGTGGAG TGGTTATTCC AACAACGTTG ACCCTATCAG AGCTCTATGA TGTTACCTCA
ACTCCCCCTT CAGATTCTGA TGAGCAGGAG CAGATCAATT TTGGTAAGAA AAGAGGTTGG
TATTACAGTT TCTCCCGTAC TGGCGAGAAG AATTTGTCAC CAGCCACCAT AGTTAATGGG
CGAGTATTCT TCACCTCATT TGTGCCGCCC GGTGATAACT CCAGCAGTGA TCAATGTATT
AGTGCGGGAG CGGGCTTTCT CTATAACTTC GATCTTCATC GGGGAACGCG AACACATACC
TACATAAGAA CGGGTGAATT TGTGCCTGAT ACGCCTCAGC TCATCGTTCC TCCACGTGTG
GTTAATGAAG GCGAAGAAGC TAACCCCCCG AATATGTACC TTATCGGTAT TGGTGCAGCC
CTGCCTGGTA ACCCACCTGA AGGGTGTGAC CCTAGTGATT TAAAGTGTGT GGGCGGCGGG
TTAAGTACTA ATAGAATTTA TTACTATACG TCTGATTAA
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| Protein sequence | MSIFAPELTA ICGQVCSRLT AIGRSTFSYR RFRLSSFLIS SSAIYILFPH SILADDTELY
VHEASARSGA RPQMLIIFDN SGSMNTTVVG AEKPYSSNAG GISGDNLGKQ NKLYFTRGAT
AAEDQPNPSN TSETRHFSGV INSCESSWES LHEYGFYTGY FRGYSFTGSE GTWKELDDTG
TEGVIGIDCF EDIQDEKWAN AVGVTSGLPV DGRGSSSQPR FYTYANGSST EATKQRARER
AELTGFGTGR PLTIYTQDYL TWQHGTKEKA NISRLEIAKN AVKSIILTTP SVDFGLAVFN
VNAWNEFERD GGRIISGLKE NTSGVKSDLI EVIGDIQGKT NTPLCETLYE AYRYFSGLSV
DFAYKNTDLP GAGYYVSQQP QMDASVAKSG IYESPFKKCQ NNASVVIITD GVPTKDAAAN
GFIDTLTGGA DKYGSAATGD LNYLSAMSSW MNKYDLNTSE PGEQTVSTHT IGFSKGAASA
AALLKKTAEV GGGRYFDATN ANLLQGSLQQ VVSEALDTNS SFTSPAVASN NFNRTQSFEY
AYYSIFLPNK GPTWLGNLKK YRVTGKGEVV DKAGNPAIGL DGNIKSTACS FWTPSAVCSA
GGDGNEVEKG GALSAMQAAD SRTIYSNLNT GLTELTVNNV TSTAGGTENL VNYLGVAEEQ
FPSLFGWAMG LDVDNNKGLE SIPNPATNWR DDIMGDALHS KPLALNFGTK STPDVRIVMG
TNHGFLHMFK DDSSSNSVTE NWAFIPYELL PNLKTLRANV PTGVHSVYGV DGSPVAYTES
NDSGIEKAWL FFGMRRGGSS YYAIDISNPD NPSFMWKVDA SSPGMSELGQ SWSTPVVTTI
PGRSSESPVL IFGAGYSPSG KDGAGIGADD VKGRGVFILD AETGALVHQF GSASTGGTQL
PGISDSIPSS VAVLDSNADG ATDRIYATDT GGNVWRMDMP SADTNKWSGF KFASLGGGVQ
SSDRRFYSAP AVAQTVITNI AEVTVENGGT TTKTKTKLNI PYDAVVVGSG HRAMPSDLSR
SDMFFTLQDR NVVSRSFKGG GSGVVIPTTL TLSELYDVTS TPPSDSDEQE QINFGKKRGW
YYSFSRTGEK NLSPATIVNG RVFFTSFVPP GDNSSSDQCI SAGAGFLYNF DLHRGTRTHT
YIRTGEFVPD TPQLIVPPRV VNEGEEANPP NMYLIGIGAA LPGNPPEGCD PSDLKCVGGG
LSTNRIYYYT SD
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