| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1353 |
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| Symbol | |
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| ID | 6115593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1704329 |
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| End bp | 1704697 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632841 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001759740 |
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| Protein GI | 170725714 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00045551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATATT ACAGTCGCAG ATTTATTAAG CCTGAACATT TAAACCCTGC AAACCTTCTC
TTTGGTGGGC AGTTGTTGAG TTGGATTGAT GAGGAGGCGG CAATTTTTGC TGGCTGCCAG
ATGAAGAGCC AACAATTAGT GACCAAATTA ATCTCTGAGA TCAACTTTAT GACACCCGCA
AGGCAGGGGG ATGTGATTGA GTTTGGCCTT GAGTTAATCA GTGCGGGAAG TAGCTCTATT
ACTGTTCGCT GTGAAGTGAG GAGTAAGGTT TCACACCTTC CCATTGTTAC TATCAATCAG
ATGGTATTTG TTAATGTGGA TGAAAAGGGC TTGCCTAAGC CCCACGGTAT AAGGGCAAAT
GCCGCTTAG
|
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| Protein sequence | MKYYSRRFIK PEHLNPANLL FGGQLLSWID EEAAIFAGCQ MKSQQLVTKL ISEINFMTPA
RQGDVIEFGL ELISAGSSSI TVRCEVRSKV SHLPIVTINQ MVFVNVDEKG LPKPHGIRAN
AA
|
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