Gene Swoo_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1347 
Symbol 
ID6115587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1696174 
End bp1697184 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content45% 
IMG OID641632835 
Productthreonine aldolase 
Protein accessionYP_001759734 
Protein GI170725708 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000974839 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000417727 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATAGATT TTCGTAGCGA TACAGTGACT ATGCCTACGC CAGCTATGCG TAAGGCTATG 
GCCAATGCCG AAGTCGGCGA TGATGTATAT GGTGATGACC CGTCGGTAAA TCGTCTAGAG
GCGATGTCTG CCGAAATGTA TGGTTTCGAT GCTGCGCTCT TTACCTCCTC TGGTACTCAG
GCAAATCTAT TGGCCCTGAT GTCCCATTGT GAGCGTGGTG ATGAGTATCT GTGTGGCCAA
CAGGCCCATA ACTATAAGTT TGAGGGAGGC GGAGCAGCAG TACTTGGCAG TATTCAACCA
CAACCTTTGA CTAACCAAGC TGACGGCACT ATTTTGCTTT CAGAGGTTAA AGCTGCAATA
AAGCCAGACG ATATTCATTT CGCTAAGACA CGTTTGTTGA GCTTGGAAAA TACTATTGGT
GGTAAAGTGC TTCCTCAAGA GTATTTAGCG CAAGCGCAAA CCTTAGCATT TGATAATAAG
TTAAAGATAC ACTTAGATGG AGCCCGTGTT GCTAATGCTG CCGTGGCACA AAATATTGCG
ATTAGTGAAG TAACTCAATT TTTTGACTCT GTTTCTATCT GTTTGTCTAA AGGACTTTGT
GCGCCAGTTG GTTCACTGTT ATTGGGTGAT GAGCGCCTCA TCGCGAAAGC CAGACGCTGG
CGTAAAATGC TTGGTGGTGG AATGCGCCAA GCTGGAGTTT TGGCCGCTGC AGCGAGTTTA
GCGATTACTG AGCAAGTTGA GCGTTTAGCG ATTGATCATG ATAATGCTGC CTATCTTGCA
CAGCAGTTAG CGGCTTTGGA TGAAGTGAGC GTTGACCTCT CCTTAGTGCA AACTAACATG
GTTTATGTTC AATTTTCGCC TCAGCTGAAT GTACAGACTA TTGCTGCTAA GTTGAAGGCT
AACGGTATAC TCATTAGCCC GAGTTCAACA GTTCGCCTAG TTACCCATGC AGATGTAAGC
CGTAAGGATA TTGATACCTT CATTACTGAG CTTAAACGTC ATCTAAAGTA G
 
Protein sequence
MIDFRSDTVT MPTPAMRKAM ANAEVGDDVY GDDPSVNRLE AMSAEMYGFD AALFTSSGTQ 
ANLLALMSHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQADGT ILLSEVKAAI
KPDDIHFAKT RLLSLENTIG GKVLPQEYLA QAQTLAFDNK LKIHLDGARV ANAAVAQNIA
ISEVTQFFDS VSICLSKGLC APVGSLLLGD ERLIAKARRW RKMLGGGMRQ AGVLAAAASL
AITEQVERLA IDHDNAAYLA QQLAALDEVS VDLSLVQTNM VYVQFSPQLN VQTIAAKLKA
NGILISPSST VRLVTHADVS RKDIDTFITE LKRHLK