Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1347 |
Symbol | |
ID | 6115587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1696174 |
End bp | 1697184 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632835 |
Product | threonine aldolase |
Protein accession | YP_001759734 |
Protein GI | 170725708 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000974839 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000417727 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATAGATT TTCGTAGCGA TACAGTGACT ATGCCTACGC CAGCTATGCG TAAGGCTATG GCCAATGCCG AAGTCGGCGA TGATGTATAT GGTGATGACC CGTCGGTAAA TCGTCTAGAG GCGATGTCTG CCGAAATGTA TGGTTTCGAT GCTGCGCTCT TTACCTCCTC TGGTACTCAG GCAAATCTAT TGGCCCTGAT GTCCCATTGT GAGCGTGGTG ATGAGTATCT GTGTGGCCAA CAGGCCCATA ACTATAAGTT TGAGGGAGGC GGAGCAGCAG TACTTGGCAG TATTCAACCA CAACCTTTGA CTAACCAAGC TGACGGCACT ATTTTGCTTT CAGAGGTTAA AGCTGCAATA AAGCCAGACG ATATTCATTT CGCTAAGACA CGTTTGTTGA GCTTGGAAAA TACTATTGGT GGTAAAGTGC TTCCTCAAGA GTATTTAGCG CAAGCGCAAA CCTTAGCATT TGATAATAAG TTAAAGATAC ACTTAGATGG AGCCCGTGTT GCTAATGCTG CCGTGGCACA AAATATTGCG ATTAGTGAAG TAACTCAATT TTTTGACTCT GTTTCTATCT GTTTGTCTAA AGGACTTTGT GCGCCAGTTG GTTCACTGTT ATTGGGTGAT GAGCGCCTCA TCGCGAAAGC CAGACGCTGG CGTAAAATGC TTGGTGGTGG AATGCGCCAA GCTGGAGTTT TGGCCGCTGC AGCGAGTTTA GCGATTACTG AGCAAGTTGA GCGTTTAGCG ATTGATCATG ATAATGCTGC CTATCTTGCA CAGCAGTTAG CGGCTTTGGA TGAAGTGAGC GTTGACCTCT CCTTAGTGCA AACTAACATG GTTTATGTTC AATTTTCGCC TCAGCTGAAT GTACAGACTA TTGCTGCTAA GTTGAAGGCT AACGGTATAC TCATTAGCCC GAGTTCAACA GTTCGCCTAG TTACCCATGC AGATGTAAGC CGTAAGGATA TTGATACCTT CATTACTGAG CTTAAACGTC ATCTAAAGTA G
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Protein sequence | MIDFRSDTVT MPTPAMRKAM ANAEVGDDVY GDDPSVNRLE AMSAEMYGFD AALFTSSGTQ ANLLALMSHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQADGT ILLSEVKAAI KPDDIHFAKT RLLSLENTIG GKVLPQEYLA QAQTLAFDNK LKIHLDGARV ANAAVAQNIA ISEVTQFFDS VSICLSKGLC APVGSLLLGD ERLIAKARRW RKMLGGGMRQ AGVLAAAASL AITEQVERLA IDHDNAAYLA QQLAALDEVS VDLSLVQTNM VYVQFSPQLN VQTIAAKLKA NGILISPSST VRLVTHADVS RKDIDTFITE LKRHLK
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