| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1342 |
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| Symbol | |
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| ID | 6115582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1692003 |
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| End bp | 1692881 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632830 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759729 |
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| Protein GI | 170725703 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00332672 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00012242 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTACTA TCGAGCAATT AACCTCTTTC ATTACCACTG TTGAATCAGG CTCTTTTTCA
GCAGCTGCAC GTAAGCTGGG CAAGGTGCAA TCAGCCGTAA GTCAAAATAT AATGAACATG
GAGATAGACA CGGGGCTTGT GCTTTTTGAC AGAAGTGGCC GCTACCCTGT GCTGACACCT
AAAGGCAGGC AACTATTACC ACAAGCTAAA GCCGTTATCG CTCAGCATCG CCGCCTGACT
CAACAAGTCA GTGCATTAGA GTCTGAGGAG ACAAAAAAAC TCACCTTAGC TATCGATGAA
GGGATCCCCT ATGCCCACCT TATCGAACTA CTTCCACAAC TTGAGCATGC TCACCCCGAG
TTGGAGCTGG AGTTTCTTTG CGCTTCAAGT CAGGATGTGA TCCAACTGGT CTTAGATAAA
AGAGCCACCA CGGGCCTGGT ATTTAGCGAT AACCTATACC CTGAGTCAAT TGACTTCGAA
ACTTTAGGCA CTGTAGAGTT CGAGCTTCTG ATCAGCCCTA AGCACCCTTT AGCTCAAACA
GATTCCCCCC ATATGGATAT GTTGAAACTT CATCGACAAC TTGTCATAAG CTCTAAAGGC
TCAAAAACCA CTTGGTTCAA TCAAGCTCAT TCACCGGATG TATGGCACGC TGATAACTAT
TATGTATTGT TGGAATTAGC TAAATCGGGG TTTGGCTGGA CTTTGCTTCC GCTTCACCTA
GCAAAAGAGG CATTGGAGGC TAATACCCTT TGTAGGGTAC CGGTTCAATT TGAGCAGCTT
GGGTGGCAAG CAAATGTGGA TGTGATACAG GAAAGCTCAA TGATTTCCGA AGCCAACCAC
ACCCTACGAG CTCTTCTACG CAGGCTACTT CAGCAGTAA
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| Protein sequence | MSTIEQLTSF ITTVESGSFS AAARKLGKVQ SAVSQNIMNM EIDTGLVLFD RSGRYPVLTP
KGRQLLPQAK AVIAQHRRLT QQVSALESEE TKKLTLAIDE GIPYAHLIEL LPQLEHAHPE
LELEFLCASS QDVIQLVLDK RATTGLVFSD NLYPESIDFE TLGTVEFELL ISPKHPLAQT
DSPHMDMLKL HRQLVISSKG SKTTWFNQAH SPDVWHADNY YVLLELAKSG FGWTLLPLHL
AKEALEANTL CRVPVQFEQL GWQANVDVIQ ESSMISEANH TLRALLRRLL QQ
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