Gene Swoo_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1329 
Symbol 
ID6115569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1682556 
End bp1682843 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content43% 
IMG OID641632817 
Producthypothetical protein 
Protein accessionYP_001759716 
Protein GI170725690 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00734042 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACCAG TTATCAAGCA GCAGGATGAT CTGCTGCTTA ACCTATATAT CCAGCCTAAA 
GCTAGCCGAG ATCAGATAGT CGGTGTTCAC GGTGAAGAGC TAAAGATAGC CATAACAGCA
CCGCCAGTTG ATGGCAAAGC AAATGCCCAC TTGATCAAAT ACCTCTCAAA GGCATTTAAA
GTTCCTAAAG GAGATATCAA CATCCTTAAA GGTGAGCAGG GAAGGCATAA ACAGGTAAAG
GTTATATCTC CCAGAGTCAT ACCTGAAAAT ATAAGTTCAC AGCTCTAA
 
Protein sequence
MAPVIKQQDD LLLNLYIQPK ASRDQIVGVH GEELKIAITA PPVDGKANAH LIKYLSKAFK 
VPKGDINILK GEQGRHKQVK VISPRVIPEN ISSQL