Gene Swoo_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1328 
Symbol 
ID6115568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1682058 
End bp1682492 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content40% 
IMG OID641632816 
Producthypothetical protein 
Protein accessionYP_001759715 
Protein GI170725689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00762058 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAAAAG CCATATTATC AGCACTAATT CTAAGCCTTG CTTTGGTTGG CAATGTTTCA 
GCAGAGCAAA AACAGAAGAT TGGCAATTTT GATATCCACT ATGTCGCGTT AAGCAGCACT
TTTCTGACGC CTAGCATAGC TAAATCCTAT GGAATTAAAC GCAGTAGTTA CACCGGCATC
ATCAATATCT CAGTTTTGGA CACTAGCCAG GAGGGTAACC CTGCTGTCCC AGTCCAAATT
TCAGGTGTTG CTAACAATCT ATTAGATGCA CGCATCACCC TAAAATTCAG AGAGATCCGT
GAAGGTGAAG CTATCTATTA TATTGCCGAA GTGCCCTATC GTGATGATCA GGAGATCAAC
TTCAACATTG CGATACAATA CGCAAAGAAG CTTAATACTC AGCTGAAATT TAAACAAAAG
TTCTATGTAG AGTAA
 
Protein sequence
MLKAILSALI LSLALVGNVS AEQKQKIGNF DIHYVALSST FLTPSIAKSY GIKRSSYTGI 
INISVLDTSQ EGNPAVPVQI SGVANNLLDA RITLKFREIR EGEAIYYIAE VPYRDDQEIN
FNIAIQYAKK LNTQLKFKQK FYVE