| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1326 |
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| Symbol | |
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| ID | 6115566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1680101 |
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| End bp | 1681237 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632814 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001759713 |
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| Protein GI | 170725687 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0437214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACCC TTCCTCCATT AAGCTTGTAC ATCCATATTC CATGGTGCGT TCAAAAATGC
CCCTATTGTG ACTTTAACTC CCATGGTCAA AATGGTGAGC TCCCTCAGCA GGAGTATGTT
GACGCGCTCA TCAGTGATCT AGCCCATGAC TTGCAATATG TTCAGGGTCG AAAGCTACAC
TCGATCTTTA TCGGAGGCGG TACGCCCTCG CTGTTTCATG CTTCACAAAT AGAGAAATTG
CTAACCCATG TATCTCAAGT TATCCCATTT CAAGATGATA TTGAGATCAC CATGGAGGCC
AACCCTGGCA CTTTAGAGCA CGATGACTTT GAAGCTTACT ACCAAGCAGG TGTTACACGT
CTCTCTATTG GGGTGCAAAG CTTCTCCAGT GACAAACTTA ATCTACTAGG TAGGATCCAT
GATGAAGATG AAGCTAAAGT CGCCGCTCAA AAAGCCCTAA GCGCTGGTTA CAAGAGCTTT
AATCTAGATC TGATGCATGG ATTACCCAAT CAAAGCTTTG CTGAAGCGAT GGCGGATATA
GATACAGCTG CGGCTCTCTC TCCCCCACAC CTCTCTTGGT ATCAGTTAAC GATAGAGCAG
AACACCCTAT TCCATTCAAG GCCACCTCAA CTGCCTGATG ATGAGGCGCT ATGGGAGATA
TATGAACAGG GGCAAAAAAA GCTTGCAGCA CTTGGCTATC AGCAGTATGA GATATCCGCC
TATGCAAAAC CGGGGTTTCA ATGTCGCCAT AATATTAACT ACTGGCAGTT TGGAGACTAC
TTAGGCATAG GTTGTGGAGC CCACGGAAAA ATCACCATAC TCAATGAAAA CAAGATAATC
CGAACCGTGA AGATTAAACA TCCTAAAGGT TATCTTGCTA CCGACAGTTA CAATTTCGAA
ACCACTGAGG TAGCGAAAGA AGATCGCGCT CTTGAGTATT TAATGAATCG TTTCAGACTT
ATGTCGCCCA TCCCCAAGAG AGAATTTGAG CAGAGAACAG GCCTATCAAG AGAGGTATTA
ACCTCTGGTA TTCAACGCGC AAAAGAGAAA CAGCTTCTCA CTGAAAATGA TGAATACTGG
GAATTGACCA GCAGAGGAAA GCTATTTGTA AACGAGCTAC TTTCTCAGTT CTGCTAA
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| Protein sequence | MLTLPPLSLY IHIPWCVQKC PYCDFNSHGQ NGELPQQEYV DALISDLAHD LQYVQGRKLH
SIFIGGGTPS LFHASQIEKL LTHVSQVIPF QDDIEITMEA NPGTLEHDDF EAYYQAGVTR
LSIGVQSFSS DKLNLLGRIH DEDEAKVAAQ KALSAGYKSF NLDLMHGLPN QSFAEAMADI
DTAAALSPPH LSWYQLTIEQ NTLFHSRPPQ LPDDEALWEI YEQGQKKLAA LGYQQYEISA
YAKPGFQCRH NINYWQFGDY LGIGCGAHGK ITILNENKII RTVKIKHPKG YLATDSYNFE
TTEVAKEDRA LEYLMNRFRL MSPIPKREFE QRTGLSREVL TSGIQRAKEK QLLTENDEYW
ELTSRGKLFV NELLSQFC
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