Gene Swoo_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1317 
Symbol 
ID6115557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1670582 
End bp1671157 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content41% 
IMG OID641632805 
Producthypothetical protein 
Protein accessionYP_001759704 
Protein GI170725678 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.269449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.532637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ATTTATTGGT GACGGCATTA ACGGCTTCGC TTTTTCTTGG TAATGCAGCT 
CAAGCTGCAG ATTATATTGT TGATACAGAT GGTGCTCATG CATCGATACA ATTTAGAGTT
AGCCACCTAG GCTATAGCTA TGTTGCAGGT CGATTTAATG ATTTTAAAGG TGATTTTAGC
TTTGATGCTA ATAAAGTCGC CGATGCTAAA GTCAATATGG TGATTAATAC TACGAGCATC
GACTCTAACC ATGCAGAGCG TGATAAGCAT CTTCGTAGCG CTGACTTTTT AAACACTGCA
AAATTCCCAC AAGCGACATT CACCTCTACC TCAGTTGAAG ATAAAGGTAA TGGAGATTTT
ATTCTAAATG GTAACTTTAC GTTAAACGGG GTCACTAAAC CGCTTGCTAT CTCTGCCACT
ACGGTTGGAG AGGGGCAAGA TCCATGGGGC GGTTATCGTG TTGGTTTTAC AGGGACTACT
GAGTTTGCCC TCAAAGATTA CGATATAAAG ATGGACCTTG GTCCTGCATC GTCTCATGTT
AAGCTAGATC TTGTTGTTGA AGGAATTAAG CAGTAG
 
Protein sequence
MKKHLLVTAL TASLFLGNAA QAADYIVDTD GAHASIQFRV SHLGYSYVAG RFNDFKGDFS 
FDANKVADAK VNMVINTTSI DSNHAERDKH LRSADFLNTA KFPQATFTST SVEDKGNGDF
ILNGNFTLNG VTKPLAISAT TVGEGQDPWG GYRVGFTGTT EFALKDYDIK MDLGPASSHV
KLDLVVEGIK Q