| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1315 |
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| Symbol | |
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| ID | 6115550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1666379 |
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| End bp | 1667686 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632798 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_001759702 |
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| Protein GI | 170725676 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0258067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATGA CATTAAATAG TGACAATAAG CGCAGCAGTA TTATCCCTAT GACAATAGTG
GCTGTGCTAT TTTTCGTATT GGGATTCGCG ACCTGGCTCA ACGGCTCGCT GATGCCATAC
CTGAAACAGA TCCTCCAGCT CACCCCACTT CAAGCCTCTC TTATCCTCTT CTCCTTTTAC
ATTGCAGTGA CGTTTACTGC GCTTCCATCT GCATGGTTGA TTAGAAAAGT GGGTTATAAG
AATGGCATGG CACTAGGCAT GGGCGTCATG ATGCTTGCGG GGTTGTTATT TATCCCAGCA
GCTAAGACAC AGATATTTGC TCTGTTTCTT TTTGCTCAGC TTGTGATGGG GGCGGGGCAG
ACGTTACTGC AAACTGCGGT TAACCCTTAT GTTGTTCGAA TTGGTCCTGA GGAGTCTGCC
GCTGCACGTG TTAGTGTTAT GGGGATTCTG AATAAAGGGG CCGGCGTTAT TGCTCCTTTA
GTATTCAGTG CGCTTATTCT TAATAGTTTT AAAGATAGAG TTGGCACTGA GTTAACATCT
GCTCAGATCG ATGAGATGGC TAATGGGCTA GTACTTCCCT ATTTAGGCAT GGCGTTATTT
ATCGGTTTAT TGGCATTAGT GGTTAAGAAG TCACCCCTAC CTGAGCTAAC CGATGAAGAT
GAAGGCGAGC AAACAAATAA CAAGGGACAG ATTAAAGAGG CGCTCTCTCA CCCTAACCTT
GCTTTTGGTG TTGTAGCGCT ATTCTTCTAT GTGGCTGTAG AAGTTATCGC GGGTGATACC
ATAGGTACAT TTGCGCTTTC ATTAGGCATC GAAAGTTATG GTGTGATGAC CTCATATACC
ATGATCTGTA TGGTACTAGG TTACACCTTA GGTATTTTGA CTATTCCGCG TTTTATCTCT
CAACCAAAAG CGCTAATGAT CTCAGCTATT TTAGGTCTCA TTCTCACTAT AGGCATCGTC
TTCGGTGACA ATGAGTCCTA CGCAATCGCT AATACCTTAT TAGTCCCTTT TGGTGGTGCT
CAGCTGCCTG ATACCTTGCT AATGATCGCT TTCTTAGGTT TAGCTAATGC AATCGTATGG
CCTGCAGTGT GGCCACTTGC ATTGTCAGGT ATGGGTAAAT TAACCAGTAC TGGTTCGGCA
CTTCTGGTAA TGGGTATTGC TGGTGGTGCG TTTGGTCCGC TATTTTGGGG ATTAACTAGC
TCAGTCTCAT CGCTAGGACA ACAGGGCGGG TATATGGTGA TGCTGCCTTG TTACCTATTT
ATCCTGTTCT ATGCGGTTAA AGGCTATAAG ATGAAAAGCT GGAAGTAA
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| Protein sequence | MEMTLNSDNK RSSIIPMTIV AVLFFVLGFA TWLNGSLMPY LKQILQLTPL QASLILFSFY
IAVTFTALPS AWLIRKVGYK NGMALGMGVM MLAGLLFIPA AKTQIFALFL FAQLVMGAGQ
TLLQTAVNPY VVRIGPEESA AARVSVMGIL NKGAGVIAPL VFSALILNSF KDRVGTELTS
AQIDEMANGL VLPYLGMALF IGLLALVVKK SPLPELTDED EGEQTNNKGQ IKEALSHPNL
AFGVVALFFY VAVEVIAGDT IGTFALSLGI ESYGVMTSYT MICMVLGYTL GILTIPRFIS
QPKALMISAI LGLILTIGIV FGDNESYAIA NTLLVPFGGA QLPDTLLMIA FLGLANAIVW
PAVWPLALSG MGKLTSTGSA LLVMGIAGGA FGPLFWGLTS SVSSLGQQGG YMVMLPCYLF
ILFYAVKGYK MKSWK
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