Gene Swoo_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1312 
Symbol 
ID6115547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1662798 
End bp1663700 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID641632795 
ProductATPase BadF/BadG/BcrA/BcrD type 
Protein accessionYP_001759699 
Protein GI170725673 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000103615 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTGA ACCAGACGAA GGAGAATCCG TTGTTTATAG GTATTGATGG TGGCGGCAGC 
AAGTGCCGTG CAACGATTTA CTCTGCGGAA GATGGTGTAA TAGGTACTGG GGTAGCTGGG
CGTGCAAATC CACTTCACGG TCTATCTCAA ACATTTGAAT CAATTCAATT ATCTACTGAA
CTTGCATTAA AAGATGCAGG TATGGCTATA GGTGATAGCA AGGGGTTAGT TGCCGGGCTT
GGTTTAGCAG GGGTGAATGT CCCTAGGCTC TACCAAGATA TCGTCAATTG GGAACACCCA
TTTGCAGATA TGTATGTCAC CAGCGATCTT CATACTGCTT GTATTGGTGC CCATAAAGGT
GGTGAAGGGG CCGTTATCAT TACCGGTACT GGCTCATGTG GTTACGCTAA TGTTGATGGC
AAATTTATTA GTCTCGGTGG CCATGGTTTT GCTTTAGGTG ATAAAGGTAG TGGTGCTTGG
CTAGGTTTAA AGGCTGCTGA ACAATCCCTA CTTCACTTAG ATGGCTTTGC AGAGAAAACA
ATATTAACTG AAAAATTACT TAACCATTTT AAAGTCAATG ATGCTTTAGG TATTGTTGAG
AATTTAGCGG GTAAAAGTTC AAGTGTGTAC GCTAAGTTAG CTCGAATAGT GCTTGAGTGT
GCTAACCAAC AAGATGAGGT TGCGCAGGCG ATAGTTAAAG AGGGAGCTGC TTATATCAGT
GAGCTTGCTC GTAAACTCTT TGAGATAAAT CCTCCGCGTT TTTCTATGAT AGGTGGTCTC
GCTGAGCCAT TGGCGCCTTG GCTAGATAAA GATGTCGTGA CCAAGTTGTC ACCGACTTTA
GCACCGCCAG AGTTGGGAGC TACCTATTTT GCTCGCCAGC AGTTTGGATG TAAAGCAAGT
TAA
 
Protein sequence
MIVNQTKENP LFIGIDGGGS KCRATIYSAE DGVIGTGVAG RANPLHGLSQ TFESIQLSTE 
LALKDAGMAI GDSKGLVAGL GLAGVNVPRL YQDIVNWEHP FADMYVTSDL HTACIGAHKG
GEGAVIITGT GSCGYANVDG KFISLGGHGF ALGDKGSGAW LGLKAAEQSL LHLDGFAEKT
ILTEKLLNHF KVNDALGIVE NLAGKSSSVY AKLARIVLEC ANQQDEVAQA IVKEGAAYIS
ELARKLFEIN PPRFSMIGGL AEPLAPWLDK DVVTKLSPTL APPELGATYF ARQQFGCKAS