Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1309 |
Symbol | |
ID | 6115544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1657525 |
End bp | 1658400 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632792 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_001759696 |
Protein GI | 170725670 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.701757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.756364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCA TGCTACGACT TCGAATTAAG CTTCTCCTCA TCTCTCTATT ATCCGTTTTC TGTTTAACCC CTAATGCTTA TAGTGAAACA CTCGTCACCA CTATTCCGCA AAGTTGGCAA CTTAATTTAT TGAAAGAAGC CCTATCTCGT GTGGAAACTC AATACGATAT CTCAATGCTT GACACTGAAA TGAATCAAAA ACGTAAGGTG GAAGAGGCGT TAGCTGGAAG CATTGACATA TTTTGGAGCA TGACATCACA GCAACTTGAA GCGGTTGTGC TCCCAGTCAG AATCCCGATA TTTAAAGGCT TGTTGGGTAA TCGTTTACTG ATCATTAGAA GCGATGAGCA GCAGCGTTTT ATCGATGTCA AAAGCAGAGA TGACTTTCTG CAGTTTTATG CAGGGCAAAA TCGCTATTGG CCTGATGCGC TTATTCTTGA AGAGAATGGC TTACCTCTAA TTACCAGCTA TAAATATAAA AATTTGTATC CAATGTTAGA GGGAGGGCGT TTTGATTATT TAGCTCTTGG TGCTCAGGAG ATCTGGCAGG AGTTAGATAA AAACCCTGAT CCTAATTTGA AGGTAGATAG TGCCATCTTG CTGCAGTACC GCTCGCCTGC TTACTTCTTC ATCTCCCCAG AAAAACCTTT ACTTGCTAAA GACTTAAAGA AAGGACTAGA GAGCATGATT GCCGATGGCA GTTTTGATCA GCTGTTCAAT AAGGAGCTCG AGATTGATGC GCTCTATGAG CAAGCACAAT TTAGCAAACG TAGGATTATT CGACTACAGA CACCTGGATT GAGTTCATTA ACACCCGTAA CTCGTGATGA GCTGTGGCTT GATCTATTTA ATATGGAGGG GAAGGGCGAT GAATAG
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Protein sequence | MRFMLRLRIK LLLISLLSVF CLTPNAYSET LVTTIPQSWQ LNLLKEALSR VETQYDISML DTEMNQKRKV EEALAGSIDI FWSMTSQQLE AVVLPVRIPI FKGLLGNRLL IIRSDEQQRF IDVKSRDDFL QFYAGQNRYW PDALILEENG LPLITSYKYK NLYPMLEGGR FDYLALGAQE IWQELDKNPD PNLKVDSAIL LQYRSPAYFF ISPEKPLLAK DLKKGLESMI ADGSFDQLFN KELEIDALYE QAQFSKRRII RLQTPGLSSL TPVTRDELWL DLFNMEGKGD E
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