| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1302 |
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| Symbol | |
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| ID | 6115537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1648264 |
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| End bp | 1648773 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632785 |
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| Product | type IV pilus biogenesis protein, putative |
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| Protein accession | YP_001759689 |
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| Protein GI | 170725663 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.391633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC AACTAGGTTT TACCTTAGTG GAGTGCATCT CTACCTTAGC CGTATCCACC
ATTCTCATCT CTGTCGGCGT ACCACAATTC AATTCTCTGT ATGAATATTT TCGCTCTGAT
ACCTCTATAC GCCGAATACA GCAATCTCTC CAACTCGCTA GAAATTATGC GATTAACTAC
TCAATAAGAG TAACGGTCTG CCCTATGGAG GAGGGGCGAT GCTCAAAAGA TTGGAGGATT
GGACTAACAG TATTTACCGA CTTAGGTGAG AAGAATCTAC TTGATGGAGA TGATAGAATA
ATATTTAAAA CAAACCCTTT TAATTCAAGG GATTTTATAA CATACAACCG TTCGGCAATT
CGCTTCCAGC CAACAGGTTT AGCATCAGGA ACAAACGGAA CCCTAAAATA TTGTCCCTCT
AGCATTGATA GTGAACACTC CTCAGCCTTA ATTGTAAACC AAGCTGGTCG TGTAAGGTTT
TCAAAACAGA AGGTAATAAC CTGCGATTAG
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| Protein sequence | MKTQLGFTLV ECISTLAVST ILISVGVPQF NSLYEYFRSD TSIRRIQQSL QLARNYAINY
SIRVTVCPME EGRCSKDWRI GLTVFTDLGE KNLLDGDDRI IFKTNPFNSR DFITYNRSAI
RFQPTGLASG TNGTLKYCPS SIDSEHSSAL IVNQAGRVRF SKQKVITCD
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