| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1301 |
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| Symbol | |
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| ID | 6115536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1647590 |
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| End bp | 1648123 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632784 |
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| Product | type IV pilus biogenesis protein, putative |
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| Protein accession | YP_001759688 |
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| Protein GI | 170725662 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.397112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACAC TAGAAAAGGG TTTCACCTTA GTAGAGCTTA TGGTGACACT TGTCATTGGT
ATGATATTGA TCACTGTTGG TGTTCCCTCT TTCACAGAGA TGTACCAAGG ATATAGAGCT
GAGAGTGAAA TTAGAAAAGT ACAACAATAC CTAATGTTTG CCAGAAGCCA AGCAGTCAGC
TATGGTGCCA GAGTCACTGT ATGTCCCATT TCAGGCACTA GTTGTGGCTC TGATTGGAAG
TCAGGTTTCA GCATCTTTAT TGATAATGGC GCAGCGGCAA CTATAGATTC AACAAATGGC
GTAACAGATC CCATCATCAA ACAGGTAGAT GCATTTAACA GCAAAGACTT TTTTACCTAT
GCAGGAAGCT CTGTGAGCTT TACACCGGAT GGGCTTATTC CAACCAATTC AACAGTCGGT
ACTTTTTCAT ACTGCCCGGG CTCTACAACC AGCGAAAACT CACGTGGTGT AGAGGTCAGT
TCCTCAGGAA AGGTTCGCTT TTCTGACTCT ATTATCAATT GTACTTCTTA TTAA
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| Protein sequence | MLTLEKGFTL VELMVTLVIG MILITVGVPS FTEMYQGYRA ESEIRKVQQY LMFARSQAVS
YGARVTVCPI SGTSCGSDWK SGFSIFIDNG AAATIDSTNG VTDPIIKQVD AFNSKDFFTY
AGSSVSFTPD GLIPTNSTVG TFSYCPGSTT SENSRGVEVS SSGKVRFSDS IINCTSY
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