| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1299 |
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| Symbol | |
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| ID | 6115534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1646902 |
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| End bp | 1647288 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632782 |
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| Product | Type IV pilus biogenesis protein PilE |
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| Protein accession | YP_001759686 |
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| Protein GI | 170725660 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.799661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATGA GAAATGGTTT TACGCTAGTA GAGTTAATGG TTGGTATTGC AATTATTGGA
ATATTAACAG CAATAGCTTA CCCCTCATAT ACTGAATATG TTGCCGAGGG GGCTAGAGCA
GAGGCACATA CATCGCTGCT AAGGATCTCA AATCTACAGG AGCAGTTTTA TTTAGATAAT
AGAACTTACA CGGAAGATAT GAACGAGCTT GGTGTAGGTG CAGATCCCTT TGTGACACAA
AGTAACCTTT ATAGCGTTGA TTCAACAGGG ACTGGCAGTT TTGTTCTAGT TGCAACTGCG
CTAGGAGTCC AAGCGACTCG AGATAGTGCT TGTGCAACGA TTCAAATTAC AGATACAGGT
GCAAAAACAC CTACGGAGTG TTGGTAA
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| Protein sequence | MKMRNGFTLV ELMVGIAIIG ILTAIAYPSY TEYVAEGARA EAHTSLLRIS NLQEQFYLDN
RTYTEDMNEL GVGADPFVTQ SNLYSVDSTG TGSFVLVATA LGVQATRDSA CATIQITDTG
AKTPTECW
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