| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1295 |
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| Symbol | |
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| ID | 6115530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1641300 |
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| End bp | 1641866 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632778 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_001759682 |
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| Protein GI | 170725656 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.444338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATG GGACGAAAGG GTTCTCTTTA ATTGAGGTGT TAGTGTCGCT GGTCATTTTA
GTGATCGGCT TAATTGGCAT CTTTAATCTA CATATTGTTT CGAAGAGAAG CAGCTTTGAG
TCATTTCAGC AGACTCAAGC TTCCTACTAT GTTAACGATA TCATCAATCG CATGAAACTT
AATCGCTCTC AATTAATTAA CTATAACGGT ACTTATAGCG GTGGATTATC ACAGCCAGGG
ACTTCGTGTG ATGTTGCTGC GGGTGGCCCC GCTGTGGTCT GCACTAATGT TGAAACTCGG
CTTTGGGATC TTTACCAGTG GGAGCAGCTT TTTGGTGGCG CTTCAGAGCA ACTCAGTGGA
CGTGATGTTG GAGGGCTAGA TACTCCAACG GCCTGCATCA GGACTCAAGC CAATGGGCAG
GTGCTGGTTG TGATGACATG GAGAGGAATT AGAGCGCTCT CAGATGGAAC TGCTAATGCA
GCAGGTGATA ATGCTGCTTT CATTAAAGGG TGTGGCTCGA GTAGTGACAG ACGCCGAGTT
TATTCAATTA ATACAGTGAT CATATAG
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| Protein sequence | MNNGTKGFSL IEVLVSLVIL VIGLIGIFNL HIVSKRSSFE SFQQTQASYY VNDIINRMKL
NRSQLINYNG TYSGGLSQPG TSCDVAAGGP AVVCTNVETR LWDLYQWEQL FGGASEQLSG
RDVGGLDTPT ACIRTQANGQ VLVVMTWRGI RALSDGTANA AGDNAAFIKG CGSSSDRRRV
YSINTVII
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