Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1283 |
Symbol | |
ID | 6115518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1626896 |
End bp | 1628353 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632766 |
Product | amino acid carrier protein |
Protein accession | YP_001759670 |
Protein GI | 170725644 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000100083 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.240297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAA AATTAATGAT GTGGATCGAG TCTGCGATCA ACTACACAAA TGGCCTGCTT TGGGGCAGTG TGCTTATCTA TGTGTTAGTC GCAGCAGGTG TCCTATTTAC ACTACGCTTA GGTTTTATCC AGTTTCGTTT ATTCGGACAT GGTGTCAAAC TCGTTATTCA AGGGCGTGAG AAGATTGACG GGATCTCCTC ATTCCAGGTG TTTTGTACCT CGATGGCGGC GCGAGTCGGT ACCGGCAATA TGGCTGGTGT GGCTGTTGCT ATCACAGTAG GTGGCGCCGG CGCGATATTT TGGATGTGGC TTATTGCTAT GCTAGGTATG GCAACGGCCT TTATTGAGTC GACTCTGGCT CAAGTCTACA AAGTCAAAGA CAGTGAAGGT CAGTACCGTG GTGGTCCCGC TTATTATATG GAGCGTGGAC TGGGCAAACG CTGGATGGGG ACTATCTTCT CTATACTGCT TATTATTGCT TTTGGTTTCG CTTTTAACTC TGTGCAAGCC AACACCATGA CAGATGCACT TAATAATGCA TTTGGTTTCG ATAAAACATT CATTGGTCTT GTTATTGTAC TTGCCTCTGC TTACATTATT TGTGGTGGAT TAAAGAAGGT TGCCAAGGCA TCTGAACTGA TTGTGCCTGT GATGGCGGTG GCTTACTTAG CGATAGCCTT ACTGGTACTT GTCACCAATA TCGAGCAGGT TCCTGCAGCA CTATCACTGA TCGTTAAGAG TGCGTTAGGT TGGGAAGAGG CCGCTGGTGG CGCGATGGGC GCTATGATGG CCGGTATTGC ACGTGGTTTA TTCTCCAATG AAGCGGGTAT GGGCAGCGCG GCTAATATTG CGGCATCGGC GACACCGAAC CCTAATCACC CAGCGTCTCA GGGCTTTGTA CAGATGATCG GTGTTTTTGT TGATACCATC GTTATCTGTA GCTCCTCAGC TGCGATCATC ATGCTCTCTG GTGTACTCGA TGCACCAAAT GGACAAGAGG GGATAGGATT GCTGCAGTTA GCGTTAAATA ATGAGCTAGG TGCTTGGTCA TCTTATTTCT TGGCATTTGC GATTATCCTC TTCTGCTTCT CCTCAATTAT TGCTAACTAC AGCTACGCAG AAAGCAATGT TATGTTTTTA ACTAAGAGCA AAAAAGTACT CTTCATCTTC CGCGGCCTAG TGTTAGCCAT GGTCATGGTG GGCTCTGTGG CATCGTTAAG CTTAGTGTGG AACTTTGCTG ATGTGTCGAT GGGATTGATG GCTCTGGTTA ATATCGCTGC GATTGTGATG CTCTCTAAGG TGGCCTATTC CGTGATTAAA GACTATGAGC TTCAGCTTAA ATCTGGCGTA ACACCAACTT TTGATAGCAC AAAGTTTCCC GAAATCGATA ATTTAGAGGG CGGGATCTGG GTGAACAAAA ATCAAAAAAC GGCTAAAAGT TCTGCAGAAA CGAATTAA
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Protein sequence | MFEKLMMWIE SAINYTNGLL WGSVLIYVLV AAGVLFTLRL GFIQFRLFGH GVKLVIQGRE KIDGISSFQV FCTSMAARVG TGNMAGVAVA ITVGGAGAIF WMWLIAMLGM ATAFIESTLA QVYKVKDSEG QYRGGPAYYM ERGLGKRWMG TIFSILLIIA FGFAFNSVQA NTMTDALNNA FGFDKTFIGL VIVLASAYII CGGLKKVAKA SELIVPVMAV AYLAIALLVL VTNIEQVPAA LSLIVKSALG WEEAAGGAMG AMMAGIARGL FSNEAGMGSA ANIAASATPN PNHPASQGFV QMIGVFVDTI VICSSSAAII MLSGVLDAPN GQEGIGLLQL ALNNELGAWS SYFLAFAIIL FCFSSIIANY SYAESNVMFL TKSKKVLFIF RGLVLAMVMV GSVASLSLVW NFADVSMGLM ALVNIAAIVM LSKVAYSVIK DYELQLKSGV TPTFDSTKFP EIDNLEGGIW VNKNQKTAKS SAETN
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