| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1279 |
|---|
| Symbol | pgi |
|---|
| ID | 6115514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1619872 |
|---|
| End bp | 1621509 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641632762 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001759666 |
|---|
| Protein GI | 170725640 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000145573 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0332252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAC TGACCCAGAG CGACACCTGG CAGGCACTAA GCACTCATAC GCAGTCACTG
CCACATATGA GAGACCTGTT TGAGGGTGAT GCTCAACGTT TTAAGACTAT GTCAACTTCT
GCCTGTGGCC TATTTTTGGA TTACTCTAAA AATAGAGCGA CAGAAGAGAC ACTCTCTTTA
CTTTTTAAAC TTGCCGAAGA TGCTCAGCTA CAATCAAAAA TAGCAGGCAT GTTCAACGGC
GAAATAATCA ACACCACAGA GAAGCGCGCT GTTTTACACA CCGCCCTTCG TGCTAGCCCA
GAGCAAGAGA TACTGCTTGA TGGCGTCAAC ATTGTACAGG AAGTGCAGGA AACTCAGCAG
AAGATGGCTG AGTTTGTTAA CGCTATCACC TCTGGTCAAT GGAAAGGCTA TACAGGCAAG
AGAATAACTG ATGTCGTTAG TATCGGCATC GGCGGCTCCT TCCTAGGCCC TAAAATTGTC
TCTCAAGCAC TCAGACCCTA CTGGACTGGT GAGCTAAACT GTCATTTTGT TGCCAATGTT
GACGCCACCT CTATCTGTGA AAAGCTAAAG ACACTGGATG CTGAGACAAC CCTGTTTATC
ATGTCGTCTA AATCTTTTGG TACCCAAGAG ACACTGACAA ACACCTTAAG TGCTAAAGAT
TGGTTCCTCA AGCAAGGCGG AAGCCAGCTT GATGTGGCTA AGCATTTCGT GGCCGTCACC
TCTAATGTTC CTAAGGCGAC TGAGTTTGGT ATTGATGCAG AAAACATCTT CCCGATGTGG
GACTGGGTAG GCGGACGCTA CTCACTCTGG TCAGCTATTG GACTACCAAT TGCACTGTTA
ATTGGAATGG ACAATTTCAA GGCGCTGTTA CAAGGTGCTC ATGAGATGGA CAAGCACTTC
TTAGAAGCGC CACTGACTGA AAACATGCCA GTGATTATGG GCCTCTTCTC TCTGCTCTAT
GGTAACTTCC ACGGCGCTCA ATCCCATGTG GTACTGACCT ATGATCACTA TCTACGTGGC
TTACCCGCAT ACTTCCAGCA ACTTGATATG GAAAGTAATG GTAAGTCAGT TACCTTAGAT
GGAACCGATG TGGACTTTAG CACAGGCCCT GTTATCTGGG GCGGAGAAGG CACCAATGGT
CAACATGCTT ACCACCAGTT AATTCACCAA GGTACTGCGC TTATTCCAGC GGACTTTATT
ATGCCGCTTC AAAGCCATAA CCCTCTCGGT GAACATCATA TTCAACTGGC ATCTAACTGC
TTTGGTCAAA CACAAGCTCT GATGCAGGGA CGTAACTATG ATGAAGCCCT TAATGAGCTT
TCAGGTAGCA AGTTATCAGC TGACGAACAA GCACTGATCG CCAAACATAA AGTTATGCCT
GGCAATAAGC CAAGTAATAC GATCCTAATG GATAAGTTAA CACCATCAAC ACTAGGCTCA
CTCATTGCAC TTTATGAGCA CAGAACCTTC GTTCAAGGTG CTATCTGGGA TATCAACTCC
TTCGATCAAT GGGGAGTAGA GTTAGGTAAA AGTTTAGGTA ATGATGTACT GGAAAGACTC
AGTGCTGACA GTGATGCGAC CTCATTAGAC AGCTCCAGTA ACGGTCTAAT AAATATGTTC
AGACAAGGCA AAATCTAA
|
|---|
| Protein sequence | MTRLTQSDTW QALSTHTQSL PHMRDLFEGD AQRFKTMSTS ACGLFLDYSK NRATEETLSL
LFKLAEDAQL QSKIAGMFNG EIINTTEKRA VLHTALRASP EQEILLDGVN IVQEVQETQQ
KMAEFVNAIT SGQWKGYTGK RITDVVSIGI GGSFLGPKIV SQALRPYWTG ELNCHFVANV
DATSICEKLK TLDAETTLFI MSSKSFGTQE TLTNTLSAKD WFLKQGGSQL DVAKHFVAVT
SNVPKATEFG IDAENIFPMW DWVGGRYSLW SAIGLPIALL IGMDNFKALL QGAHEMDKHF
LEAPLTENMP VIMGLFSLLY GNFHGAQSHV VLTYDHYLRG LPAYFQQLDM ESNGKSVTLD
GTDVDFSTGP VIWGGEGTNG QHAYHQLIHQ GTALIPADFI MPLQSHNPLG EHHIQLASNC
FGQTQALMQG RNYDEALNEL SGSKLSADEQ ALIAKHKVMP GNKPSNTILM DKLTPSTLGS
LIALYEHRTF VQGAIWDINS FDQWGVELGK SLGNDVLERL SADSDATSLD SSSNGLINMF
RQGKI
|
|---|
| |