| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1271 |
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| Symbol | |
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| ID | 6115506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1611387 |
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| End bp | 1612322 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632754 |
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| Product | homoserine kinase |
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| Protein accession | YP_001759658 |
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| Protein GI | 170725632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0252184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTAA CGGTTTACGC CCCAGCTTCT ATGGGAAATG TTGGAGTCGG TTACGATCTC
TTGGGCGCTG CGCTTGCGCC GATTGATGGC AGTTTATTGG GGGATAAAGT CTCCATTGCT
GCATCTACTT CTGGAGTGCA ATTAAAGGTG GAGGGCCATT GGGCTGATAA GCTTCCACCA
GAGCCGAAGG AGAATATTGT TTATCAATGT GCACTATTTT TTATGGAGCA GCTAAATAAG
CAAGATGGGG TTGCACTTAC TTTAGAGAAA AACCTTCCAG TCGGGAGTGG CTTAGGATCA
AGTGCGAGTT CGGTTGTTGC GGCCCTCTAT GCGTTAAATG AGTATTTTGA CAGACCCTAT
GATAAGCAAG CTTTACTGCG ACTGATGGGG GAGTTTGAAG GCAAGATAAG TGGCTCTGTT
CATTATGATA ATGTCGCGCC CTGTTATTTA GGTGGGATGC AGTTGATGTT AGATACACAA
GCGAAAGTGT GTGACAGCAT CCCTTCGTTT GAAAACTGGT ACTGGGTTGT TGCCTATCCT
GGTATCTCCC TTTCGACCTC TAAGATGCGT GAACTCTTGC CAGATCATTA TGACAAGTCT
GTTGCTATCG ACTTTGGGCG TAACTTAAGT GCTTTTGTTC ACGCTTCATA TCAACAAGAT
GCTGAGCTGG CTATTTCGGT ATTGAAAGAT GTCATGGCTG AGCCTTATCG CGCATCGGCC
ATTCCTGGTT ATGAGCTAGC CAGAGACGCG TTAGATAAGT TAGGCATGTT GTCGACGGGG
ATCTCAGGAA GCGGGCCGAC ACTCTTCTCT GTTACCGATA GCTTAGAGAC GGCGCAAGCA
GCGCAGGCCT GGTTAGACTC AAACTATGTT GAGCAAGGGC TTGGCTTCTC TCATATATGT
AAGCTCGATG CCTTAGGCAC TCGCACAATA GATTAA
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| Protein sequence | MSLTVYAPAS MGNVGVGYDL LGAALAPIDG SLLGDKVSIA ASTSGVQLKV EGHWADKLPP
EPKENIVYQC ALFFMEQLNK QDGVALTLEK NLPVGSGLGS SASSVVAALY ALNEYFDRPY
DKQALLRLMG EFEGKISGSV HYDNVAPCYL GGMQLMLDTQ AKVCDSIPSF ENWYWVVAYP
GISLSTSKMR ELLPDHYDKS VAIDFGRNLS AFVHASYQQD AELAISVLKD VMAEPYRASA
IPGYELARDA LDKLGMLSTG ISGSGPTLFS VTDSLETAQA AQAWLDSNYV EQGLGFSHIC
KLDALGTRTI D
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