Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1270 |
Symbol | thrA |
ID | 6115505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1608836 |
End bp | 1611301 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632753 |
Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
Protein accession | YP_001759657 |
Protein GI | 170725631 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.739227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00698149 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGTAA TGAAGTTTGG CGGTACCTCG CTGGCTAATT GGCAACGATT TAGTGCGGCA GCGGCCATTG TCGCTGATAC AGCAAAAGAT GAGTCCGTGG CAGTGGTATT ATCGGCACCA GCAACAGTGA CAAATGGGTT GCTGGAGATG GTTGACCTTG CAATTCAAGG TGGCGATTTT AAGTCGGTAC TAGCGAATGT TGAGCGCGTA TTTACGGCAT TGTATCAAGA TGCTAGCTCC ACACTGTCAC CTTCTCAGCT ATCTCTGCTT ATGGATAAGT TAACTGAGCA ACTTAGCTTC TGGGAAAAGA AGCTGCTTGG TATCAATTTG CTCAATGAGT GCCCCGATTT TGTTCGCGCT GAAGTTTTAG TTTGCGGCGA GAAGCTCTCT TCTGCATTGA TGGTCGAATT GATGTTGACC AAGGAGATAA GTTCAGATTT ACTTGTACCT CAAGCCTTGT TTGTTGCCGA TGGCGAGCCA CTCGAGTCGG TCGTTGATAT TGAGTCAAGT AAAGCTAAAT TCAAACAAGT GCCGCTGGAG AGTAAACGAG TTTGGGTGAT GCCAGGCTTT ACCGCTGGAG ACCGGGAGGG AAGGATAGTG ACTCTTGGGC GTAATGGCTC AGATTATTCT GCAGCGGTTT TGTCAGCCTG TATCGATGCC AGTTGCTGCG AGATCTGGAC TGATGTTGAC GGGGTTTACA ATACTGATCC ACGTGTTGTT GCTGATGCAA AACTTCTCTC TCAGCTGAGT TACCAAGAGG CGATGGAGCT CTCCTATTTT GGCGCAAAAG TACTTCACCC TAAGACTATC TCTCCTATTG CCCGCTACCA CATCCCTTGT TATATCCGTA ACAGTTTTAA CCCTTCTGCC ATAGGCACCT TAGTCTCAAA TGAGGCGGAT AAAAGCGGCT TGAATGTGAA GGCCATCTCT AACCTTGATG CGCAGACGAT GTTTGATATC TCAGGCCCTG GGATGAAAGG CATGGTCGGG ATGGCGAGTC GGACGCTAGG TGCCATCTCC CGTGCTGGTG TCTCAATCTC TCTTATTACT CAAAGCTCTT CTGAGTACAG CATCAGTTTC TGTATTGCGA CTCAAGATGC TCATAAAGCA AAAGCTTCAT TGGAGTTGGA GTTCGAGTTA GAGCTGAAAA ATGAGATCTT AGAGCCGATT GAGATGCGAG ATAACTTAGC TATCGTTTCA TTGATTGGAG ATGGCATGCG CACCCATAAA GGGGTTGCTG GCAAATTTTT TCAAGCATTG GCGCAAGCGT CGGTGAACAT CGTTGCGATA GCACAGGGAT CTTCGGAGCG TTCCATCTCG ACCGTTATCG AACAGCGTAA GATTAAGCAT GCTATCTCAG CCTGTCACCA AAGCTTCTTT GATGTACAGC ACTACCTAGA CGTATTTCTT GTGGGGTGTG GCAATGTTGG TGCAGGTCTG CTTGAGCAGA TCAAACAGCA AACTCAGATG TTAAAGCAGG AGCATATCAC TATTCGCGTG TGTGGTATCG CTAACTCACG CCACATGCTT CTTGATGCCG AAGGCGTCGA CCTGAACAGC TGGCAAGGGC TGCTCAGTGA TAGCCAAACT GAGTGCGATC TCGACTTTAT GTTGCAGTGG GCCAAAGAGC AGCAGCTACT TAACCCTGTG CTGGTGGATT GTACCTCTAG TGAGTATGTG TCCAATAAAT ATCTGGATGT GATGAATGCG GGTCTGCATG TCGTGACGCC AAACAAGAAA TCAAATACTC GTGATATTGA GTACTACCGT GCACTGCGCC AAACCGCCCT TAAGCAGCGT AGACAGTTTC TTTATGAAAC CACTGTTGGT GCTGGGCTAC CTGTTATTGA TAACCTTAAA AAGTTACTGT TTGCTGGTGA TAAGCTGCTT AAGTTTAATG GCATATTATC GGGTTCTCTG TCATATATTT TTGGCATGCT CGATGAGGGG ATGACACTCT CTGAGGCGAC AGGAATTGCG CGAGATAAAT GTTTTACAGA GCCCGATCCT AGAGACGATC TCAGTGGCAT GGACGTTGCT CGCAAGGTGT TGATTTTAGC CCGTGAAGTA GGATTGGAGC TGGAGCTCAG TGACATCACT ATTGAATCAG TGTTACCTGA TGACTTTGAT GCCAGTGGAG ATGTAGAGAC CTTTATGGCT AACTTACCTA AGCTGGATCA GCAGATTGCA CAGTGGGTTG AGAAAGCGCG CTCAGAAGGA AAGGTACTGC GTTATTTGGG GCAAATTGAC GATGATGGAT GCCGCGTCAA GATAGCTGAA GTGGATGCTG ATGACCCTCT TTATAGCGTC AAAGGTGGTG AAAATGCGTT GGCTTTCTAT AGCCGTTATT ATCAACCAAT TCCGTTCGTA CTTCGCGGCT ATGGTGCGGG TACCGATGTG ACAGCTGCTG GTGCATTTGC TGATCTGCTT AGAACATTAA ACTGGACTCG GGAGATGAGT GCATGA
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Protein sequence | MKVMKFGGTS LANWQRFSAA AAIVADTAKD ESVAVVLSAP ATVTNGLLEM VDLAIQGGDF KSVLANVERV FTALYQDASS TLSPSQLSLL MDKLTEQLSF WEKKLLGINL LNECPDFVRA EVLVCGEKLS SALMVELMLT KEISSDLLVP QALFVADGEP LESVVDIESS KAKFKQVPLE SKRVWVMPGF TAGDREGRIV TLGRNGSDYS AAVLSACIDA SCCEIWTDVD GVYNTDPRVV ADAKLLSQLS YQEAMELSYF GAKVLHPKTI SPIARYHIPC YIRNSFNPSA IGTLVSNEAD KSGLNVKAIS NLDAQTMFDI SGPGMKGMVG MASRTLGAIS RAGVSISLIT QSSSEYSISF CIATQDAHKA KASLELEFEL ELKNEILEPI EMRDNLAIVS LIGDGMRTHK GVAGKFFQAL AQASVNIVAI AQGSSERSIS TVIEQRKIKH AISACHQSFF DVQHYLDVFL VGCGNVGAGL LEQIKQQTQM LKQEHITIRV CGIANSRHML LDAEGVDLNS WQGLLSDSQT ECDLDFMLQW AKEQQLLNPV LVDCTSSEYV SNKYLDVMNA GLHVVTPNKK SNTRDIEYYR ALRQTALKQR RQFLYETTVG AGLPVIDNLK KLLFAGDKLL KFNGILSGSL SYIFGMLDEG MTLSEATGIA RDKCFTEPDP RDDLSGMDVA RKVLILAREV GLELELSDIT IESVLPDDFD ASGDVETFMA NLPKLDQQIA QWVEKARSEG KVLRYLGQID DDGCRVKIAE VDADDPLYSV KGGENALAFY SRYYQPIPFV LRGYGAGTDV TAAGAFADLL RTLNWTREMS A
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