| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1250 |
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| Symbol | |
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| ID | 6115485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1588245 |
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| End bp | 1588790 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632733 |
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| Product | hypothetical protein |
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| Protein accession | YP_001759637 |
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| Protein GI | 170725611 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4539] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00054551 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000187464 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATCCG CCGAAGAGCA GTTATCTACC TATAAAAGTG TTCATTTAAA CCCTAAAAAC
ATTAAGACCC ATTTTGTTGG GATCCCCTTG ATCATCTGGT CACTGTTCTT GCTGCTTAAC
CTGATCCCAG TGACTTTCTT TGCATTAGAT ACGCCAGCAA TCAGTATCAA TGTGGCATCT
GTATTTGCAA TTGGTGTGCT GCTTTATTAT ATAAAGTTGC ATGCTCGCTT AGCCTTGGGA
TTGGCACTGT TTATTATCCC TGTGCTTTAT ACCTCATCAC TGGTTGCTCA AGTTCAAGGT
GCGCTTTGGA TAGCCCTTGC TGTTTTTGTT ATCGGTTGGG TATTTCAACT TATTGGCCAT
CAATATGAGA AAGCTAAGCC CGCTTTTATT GACGATCTAA ATCAGCTATT GATAGGGCCA
TTTTTCCTTA TGGCAGAGGT ATATTTCCTG CTGGGGCTTG AGAAGGAGCT GGATAAACAG
ATAACGCCGA TGGCGGTTGA TAAACGCCGT GCGTTAGAGG ATGAACGCAG GGCTGCGCGG
CTCTAG
|
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| Protein sequence | MKSAEEQLST YKSVHLNPKN IKTHFVGIPL IIWSLFLLLN LIPVTFFALD TPAISINVAS
VFAIGVLLYY IKLHARLALG LALFIIPVLY TSSLVAQVQG ALWIALAVFV IGWVFQLIGH
QYEKAKPAFI DDLNQLLIGP FFLMAEVYFL LGLEKELDKQ ITPMAVDKRR ALEDERRAAR
L
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