| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1241 |
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| Symbol | |
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| ID | 6115476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1578653 |
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| End bp | 1580443 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632724 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001759628 |
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| Protein GI | 170725602 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000201097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000417727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCACA TTAGAAACTT TTCGATTATT GCCCATATCG ATCACGGCAA ATCAACACTT
TCAGACCGAT TGATTCAAGA ATGTGGCGGT CTTTCTGATC GTGAAATGGC AGCCCAAGTT
CTAGATTCAA TGGACATTGA GCGTGAGCGT GGTATCACCA TTAAAGCCCA GAGCGTCACC
TTAGATTATA AAGCGTTAGA TGGCGAAACT TACCAGCTAA ACTTTATTGA TACCCCAGGT
CACGTCGATT TCTCCTATGA AGTTTCTCGC TCTTTGGCTG CTTGTGAAGG TGCGCTGCTC
GTTGTTGATG CAGGCCAAGG TGTTGAAGCA CAAACACTTG CCAACTGTTA CACCGCCCTT
GAGATGGATA TGGACGTAGT GCCTGTTCTG AACAAGATTG ACCTACCACA GGCCGATCCA
GAGCGTGTAG CGGATGAGAT TGAAGATATC GTGGGTATCG AAGCGGCCGA TGCCGTTCGT
TGCTCGGCTA AAACCGGTAT TGGTATTAAA GATGTACTTG AAGTCATTGT CGCGCAGATC
CCACCGCCAG AAGGTGATAC AGAGGGACCG CTTCAGGCTT TGATTATCGA TTCTTGGTTC
GACAGCTATC TAGGCGTCGT ATCATTGGTT CGAATTAAAA ATGGCATATT GAAGAAAGGC
GATAAGTTTA AGGTGATGTC CACAGGACAA ACCTATAACG CCGATCGAGT AGGTATCTTT
ACGCCAAAGC AAACCGACAC AGCAGAGCTG AAAACCGGTG AAGTAGGGTT TGTTATTGCG
GGTATTAAAG AGATCCACGG TGCACCAGTT GGTGATACCT TAACCCATGC TAAACATGGT
GCTGAAAAGC CACTGGGTGG ATTTAAAAAG GTGAAGCCTC AGGTTTATGC TGGTGTATTC
CCTATCTCTA CCGATGATTA TGAAAGTTTC CGTGATGCCT TGAACAAACT AAGTTTGAAT
GATGCATCAC TGTTTTTCGA GCCAGAGACC TCATCGGCCC TTGGTTTTGG TTTCCGCATC
GGCTTCTTAG GTCTGCTGCA CATGGAGATC ATTCAGGAGC GTCTTGAGCG TGAATATAAT
CTCGACTTAA TCACCACTGC GCCAACAGTA GTGTATGAGA TTGTTAAGAC CAGTGGTGAT
ACCATCTATG TTGATAACCC ATCGGATCTG CCAGCAATTA ATAATATTGC TGAGATGCGT
GAGCCGATTG TTGAGACCAA TATTCTGGTA CCAAAAGATT ACCTAGGTAA CGTTATAACC
TTGTGTGTCG AGAAACGTGG CGTACAGAAA AACATGGTGT ATCACGGGAA CCAAGTAGCG
ATCACTTATG AGTTGCCAAT GGCGGAAGTG GTCATGGACT TCTTCGATCG CCTTAAGTCA
ACCAGTCGCG GTTATGCTTC ACTTGAGTAC AACTTTGTTC GGTTTGAGCC TGCCGATATG
GTGCGCTTAG ATATCTTGAT CAATGGCGAC AGAGTCGATG CGTTAGCGAT GATTATCCAC
AAAGGTCTGA TCCGTACTAA GGGTCTAGCA CTCGTGAATA AGATGAAAGA GCTTATTCCG
CGTCAGATGT TTGATATTGC GGTTCAGGCA GCTGTTGGCA GTCAGATCAT CGCACGTTCA
TCCATCAAGG CGATGCGTAA AGATGTAACG GCTAAGTGTT ACGGTGGTGA CGTTTCCCGT
AAGAAGAAAC TGCTTAATAA GCAGAAAGAG GGTAAGAAAC GCATGAAGTC TGTGGGTAAC
GTTGAAGTAC CACAGGAAGC CTTCCTTGCC GTTCTTAAGC TCAACGATTA A
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| Protein sequence | MKHIRNFSII AHIDHGKSTL SDRLIQECGG LSDREMAAQV LDSMDIERER GITIKAQSVT
LDYKALDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
EMDMDVVPVL NKIDLPQADP ERVADEIEDI VGIEAADAVR CSAKTGIGIK DVLEVIVAQI
PPPEGDTEGP LQALIIDSWF DSYLGVVSLV RIKNGILKKG DKFKVMSTGQ TYNADRVGIF
TPKQTDTAEL KTGEVGFVIA GIKEIHGAPV GDTLTHAKHG AEKPLGGFKK VKPQVYAGVF
PISTDDYESF RDALNKLSLN DASLFFEPET SSALGFGFRI GFLGLLHMEI IQERLEREYN
LDLITTAPTV VYEIVKTSGD TIYVDNPSDL PAINNIAEMR EPIVETNILV PKDYLGNVIT
LCVEKRGVQK NMVYHGNQVA ITYELPMAEV VMDFFDRLKS TSRGYASLEY NFVRFEPADM
VRLDILINGD RVDALAMIIH KGLIRTKGLA LVNKMKELIP RQMFDIAVQA AVGSQIIARS
SIKAMRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKSVGN VEVPQEAFLA VLKLND
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