| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1239 |
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| Symbol | |
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| ID | 6115474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1577115 |
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| End bp | 1578047 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632722 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001759626 |
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| Protein GI | 170725600 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000893286 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000208433 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCGTCTTT TCCTGTTAGC ACTGTTAGTT TTACATTTTC CTGCGATGGC GCAAGAAGAT
ATGTCGGCAA AGGCTTGGCT TGAAAATATG AGTCAGGCCT TGCGTGAGCA AGAGTACAAA
ATCTCCCTTA TCCAACTTCA AGCGGATCAT ATCCGTCCTT TAGTCTACAT CCATGGCAAG
ATTGAAGATA AAGAAGTTGC GTTTCTAGAG CACCTTAATG GTCCACCTAA AAATGCGGTA
AGAGTTGGAA ATACCGTTAC TTTTATCGAA CATGATCAAC CTGCCTACAG CATCAATGCG
AGCCGTATTC AAGGCATTTT GCCGCCTGCT TTTGCCGGAG ACATCTCGTC TTTGGAATCG
GGTTACCAAT TTGTATTAGG TGGTCGTAGC CGCTTAGCGG GGCGTCCGGG TCAGTTAGTG
CGTATCATTC CTGTCGATGG CTTTAGATAT GGCTATCAAG TCTGGTTAGA TATGGATACG
TTCCTACCGC TACGTTACGA CATGTTGACC CAAGATAAGC AGCTACTTGA GCAGATCTTA
GTGGTTGAGC TGTTAGTGCT CGATGATGTG CCTGCGATAC TGAACGAAGC TTATAAGCAG
CCTTGGCCTG GGGTTATTGC TCAACCCACC AGAGATGCTG GTGATAACTG GAAGTTTAAG
TGGTTACCTG AAGGGTTTAA CGTTTTAGTC AAAGACAGTC ACAGGTTAAT GGGCAGCCAC
GAAGCGGTTG AATATATCGC GCTTAGTGAT GGTATAGCCA ATATTTCTGT CTATGTTGCT
AGAGCGGGTG ATGCCGTTAT GCCTGAAGAG TTAGTCACGA GAAATGGACT CTCTTTAGCT
ACAGAGCGGA TCGGTAATGC GGAAGTGGTT GCTGTAGGTA AAGTGCCTGC TGAAACCCTA
TCTCGCATCG CTAAAAGCAT CACCATAGAG TAG
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| Protein sequence | MRLFLLALLV LHFPAMAQED MSAKAWLENM SQALREQEYK ISLIQLQADH IRPLVYIHGK
IEDKEVAFLE HLNGPPKNAV RVGNTVTFIE HDQPAYSINA SRIQGILPPA FAGDISSLES
GYQFVLGGRS RLAGRPGQLV RIIPVDGFRY GYQVWLDMDT FLPLRYDMLT QDKQLLEQIL
VVELLVLDDV PAILNEAYKQ PWPGVIAQPT RDAGDNWKFK WLPEGFNVLV KDSHRLMGSH
EAVEYIALSD GIANISVYVA RAGDAVMPEE LVTRNGLSLA TERIGNAEVV AVGKVPAETL
SRIAKSITIE
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