| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1238 |
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| Symbol | |
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| ID | 6115473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1576463 |
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| End bp | 1577065 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632721 |
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| Product | anti sigma-E protein, RseA |
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| Protein accession | YP_001759625 |
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| Protein GI | 170725599 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3073] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000123074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000016477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATAAAT TAGGTCAGGA ATGGGTATCC GCTGCCGTCG ATGGTGAAGT CGATGAGCAG
GCGTTGGCTG AACTTGCAGC TAACAAGGAT TCACATGAGC AGTGGCGTGA TTATCATATG
ATAGGCGACG CAATGCGTGG TGAGTTACCT AAGACAATGA ACTTAGACCT CTCAGCTAGT
ATCGCTGCCG CAATTGAACT GGAGCCAGCT ATTTTAGCCC CAGCTCAGCC TAAGCTTGAA
GAGACACAAG TGGCTAAGAA GTCGAATGTG ATCCCTATGT TTAAGCAGTT TGGCCAATAT
GCCATCGCTG CAAGTGTTGC CTTAGTTGCT GTTATTGGTG TTCAAAACTA TAGCCAAGAG
ACAGCTATCG ATGCATCACC ACTACCTGTG CTGAATACGC GTCCACTTGT GGGCAGTGTT
ACGCCTGTGA GTCTGCAAAC TGGTCCAGTT CAACAAAACC AAGGTTTCAG TAATGTTCAG
ATGAAAGAGC AGCGTCAACG CATCAATGCT TATATTCAAG ATCATATGTT GCAACAGAGA
TTGAATAATG GGGTTAAAAT AGAAGACAAT AGTGGAGTTG ATTCCATTCC TGTGAGTAAC
TAG
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| Protein sequence | MDKLGQEWVS AAVDGEVDEQ ALAELAANKD SHEQWRDYHM IGDAMRGELP KTMNLDLSAS
IAAAIELEPA ILAPAQPKLE ETQVAKKSNV IPMFKQFGQY AIAASVALVA VIGVQNYSQE
TAIDASPLPV LNTRPLVGSV TPVSLQTGPV QQNQGFSNVQ MKEQRQRINA YIQDHMLQQR
LNNGVKIEDN SGVDSIPVSN
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