Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1236 |
Symbol | |
ID | 6115471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1574039 |
End bp | 1575649 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632719 |
Product | L-aspartate oxidase |
Protein accession | YP_001759623 |
Protein GI | 170725597 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0029] Aspartate oxidase |
TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.305386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000186096 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAG TAGTTGAACA CCAATCTGAC GTTTTGGTTA TTGGCAGTGG CGCTGCAGGC CTAACATTAG CGTTGCATCT TGCTGAAAAG TCACAAGTAA TATTATTATC AAAGGGTCCT CTGAGTGAAG GCTCGACCTA CTATGCCCAG GGCGGCATCG CCTCGGTATT TGATGAAGAT GATACGATAG AATCCCACGT TGCCGATACT TTAGTCGCTG GCGCAGGTTT ATGTGATGAG TCAGTGGTCA CTTTTACCGC AAAAAATGCA AAAAGCTCCA TGGAGTGGCT AATAAAGTGT GGCGTTGCTT TTGATAAAGA GGAGAGCTTC GAAGGCGATG CTAGCCAAGC TCCCTACCAC CTCACACGGG AGGGCGGACA TAGTCATAGA CGGATCCTCC ATGCCGCCGA TGCCACGGGA AAAGAGGTTC AAGTCACTCT GCAAGATAGA GCTAAGGCTC ACCCAAATAT TCGTGTTCTC GAGCGCTATA ACGCCATTGA CCTTATTACC TCACGTAAAT TAAACCTCTC AGGTAATCGA GTACTCGGTG CTTATATCTG GAACAGAGAT GAGGAGCATG TAGAGACAGT TAAGGCTCGT TTTGTTGCAC TAGCCACTGG CGGCAGCTCT AAGGTGTATC AATATACCTC CAATCCAGAT ATCGCCTCTG GTGATGGCAT CGCGATGGCA TGGCGATCTG GGTGTCGTGT GGCCAATATG GAGTTTAATC AGTTCCATCC CACTTGCCTC TATCATGCAG ATGCCAGAAA TTTCCTACTG ACCGAAGCGT TACGTGGTGA AGGCGCTTTT CTTCGTCGCC CTGACGGTAG CCGCTTTATG CCAGACTTTG ATGAGCGTGC AGAGCTGGCC CCCCGAGATA TTGTCGCCCG CGCCATCGAT TATGAGATGA AACGCTTAGG TTCTGACTGT GTTTACTTAG ACATTAGCCA TAAACCCGCT GACTTTGTCA TTAAGCACTT CCCGACAATT CATAAGCGTT GCCTCGAATT CGGTATTGAT ATCACCACAG ATCCTATCCC TGTTGTGCCT GCTGCTCACT ATACTTGTGG CGGCGTGATG ACTGATATCC ATGGGCAAAC CGACCTGAAC GGCTTATATG CTATCGGTGA GGTCGCATAC ACAGGCTTGC ACGGTGCCAA CCGTTTGGCC AGTAATTCTC TACTTGAGTG CTTAGTATTT GCTCGTGCAG CAGGTGAGGA TATTGAAAGC CAACTGCATA AGATCCCTAT GCCAGGCCAC ATTCCCGCTT GGGATGAAAG TCAGGTATCC AACTCAGATG AAGAGGTTGT GATTGCCCAT AACTGGCATG AGCTCAGGCT GTTTATGTGG GATTATGTCG GTATTGTACG CTCAGATAAA CGTCTTGAAC GGGCACTTCG TCGATGCGCC ATGTTGCAGC AGGAGATCCA AGAGTATTAC AGTAACTTCC GCGTCAGTAA TAATCTACTT GAGCTAAGAA ACTTAGTTCA GGTAGCAGAG CTTATCATTC GCTGTGCAAT GGAACGTAAG GAGAGCCGAG GGCTCCACTA CAACATAGAT CATCCACAGC AGTTGGATAA ACCGACCCCA ACCATTTTAC AACCTGATTA G
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Protein sequence | MKQVVEHQSD VLVIGSGAAG LTLALHLAEK SQVILLSKGP LSEGSTYYAQ GGIASVFDED DTIESHVADT LVAGAGLCDE SVVTFTAKNA KSSMEWLIKC GVAFDKEESF EGDASQAPYH LTREGGHSHR RILHAADATG KEVQVTLQDR AKAHPNIRVL ERYNAIDLIT SRKLNLSGNR VLGAYIWNRD EEHVETVKAR FVALATGGSS KVYQYTSNPD IASGDGIAMA WRSGCRVANM EFNQFHPTCL YHADARNFLL TEALRGEGAF LRRPDGSRFM PDFDERAELA PRDIVARAID YEMKRLGSDC VYLDISHKPA DFVIKHFPTI HKRCLEFGID ITTDPIPVVP AAHYTCGGVM TDIHGQTDLN GLYAIGEVAY TGLHGANRLA SNSLLECLVF ARAAGEDIES QLHKIPMPGH IPAWDESQVS NSDEEVVIAH NWHELRLFMW DYVGIVRSDK RLERALRRCA MLQQEIQEYY SNFRVSNNLL ELRNLVQVAE LIIRCAMERK ESRGLHYNID HPQQLDKPTP TILQPD
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