| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1226 |
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| Symbol | |
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| ID | 6115461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1564435 |
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| End bp | 1565130 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632710 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_001759614 |
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| Protein GI | 170725588 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3066] DNA mismatch repair protein |
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| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000502045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00825632 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCACAC CTCACTCCCC CAAAACAATT GATGAATTAA TGAGTCGTGC CAACGATATG
GCTGGATTAA CATTAGGTCA GCTCGCCGAC TCCCACGGTT TTATCACCCC CGCTAACCTT
AAACGTGACA AAGGCTGGGT TGGACAACTA ATAGAACATG AACTCGGCGC ACTGGCAGGT
TCTAGGCCTG AACCCGATTT TCTACATTTA GGTATCGAAC TTAAAACGAT CCCAGTAGAT
AAAAATGGCA AGCCGATAGA GACCACCTAT GTAACCGTTG CCCCCTTAAT CGATATTCAA
GGATTAACTT GGGAGACCAG CGTTGTTTGC CATAAATTAC AAACTGTCCT TTGGATCCCG
ATCCAAGGCG ATAGGGATAT TCCAGTCTCA CAGCGGCAGA TAGGCAGCCC TATTTTATGG
CGCCCTAATG AGGAGGAGCT TGCCTTGTTA AAGCAAGACT GGGAGGAGAT CATGGAGTTT
ATTGCCCTTG GTCAAGTTAA ACAGCTCACA GCCAGACATG GAGAGGTGTT ACAACTTAGA
CCTAAAGGTG CAAATAGTCG CTCAGTAACT CAAAGTATTG GTCCAAACGG CAGCACTCAG
ATGACTAATC CTAGAGGTTT TTATCTTAAA ATCCCTTTTA CGCAATCGAT CCTCTCCAGA
GCATTCGGTA TATATACCCA AGCTACCTCA AGATGA
|
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| Protein sequence | MTTPHSPKTI DELMSRANDM AGLTLGQLAD SHGFITPANL KRDKGWVGQL IEHELGALAG
SRPEPDFLHL GIELKTIPVD KNGKPIETTY VTVAPLIDIQ GLTWETSVVC HKLQTVLWIP
IQGDRDIPVS QRQIGSPILW RPNEEELALL KQDWEEIMEF IALGQVKQLT ARHGEVLQLR
PKGANSRSVT QSIGPNGSTQ MTNPRGFYLK IPFTQSILSR AFGIYTQATS R
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