| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1217 |
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| Symbol | |
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| ID | 6115452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1551502 |
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| End bp | 1552194 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632701 |
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| Product | adenosylhomocysteine nucleosidase |
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| Protein accession | YP_001759605 |
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| Protein GI | 170725579 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0451567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTAG GTATCATAGG TGCAATGGAG CCAGAAGTCG CTCATCTAAT CGCTTCAATG
GACAATGCAG AATCGCAAAC CATTGCCGGT ATTGAATTTG TTGCAGGCAC ATTAGACGGA
AAAGAGGTGA TAGTCACCCG CTCTGGCATA GGTAAAGTTG CGGCCAGTAT CGCCACTACG
CTACTGATTG AAAAATACAC CCCAGACGCT GTGATTAACA CAGGTTCTGC AGGCGGTTTT
GTGGATACAC TGGCAATTGG TGACATTGTT ATCTCATCAG AGGTTCGCCA CCACGATGTG
GACGTAACCG CTTTTGGCTA TGAGATAGGT CAGATGGCTC AACAGCCAGC TGCTTTTATG
CCCGATGAAA AATTAAAAGC GGCCGCCAAC AAAGCCGTTG CCAGTTTAGG TGAAGTAAAA
GCCATTGAGG GGCTTATCTG CACCGGCGAC AGTTTTATCT GCGATCCTGT TCGCACTAAG
ACAATGTTGG AACACTTCCC AACGATGGCC GCTTGTGAGA TGGAGGGCGC TGCAATCGCC
CAAGTTTGTC ACCAATTTGC AGTTCCGTTT GTGGTGATCC GCTCGCTCTC TGATAATGCA
AACAATGACT CTCCAGTAGA TTTTGATTCA TACATAGTCA AAGCGGGTCA TCACTCTGCA
TTGATGGTGA TGTCACTTCT TAAGCATCTA TAA
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| Protein sequence | MKVGIIGAME PEVAHLIASM DNAESQTIAG IEFVAGTLDG KEVIVTRSGI GKVAASIATT
LLIEKYTPDA VINTGSAGGF VDTLAIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFM
PDEKLKAAAN KAVASLGEVK AIEGLICTGD SFICDPVRTK TMLEHFPTMA ACEMEGAAIA
QVCHQFAVPF VVIRSLSDNA NNDSPVDFDS YIVKAGHHSA LMVMSLLKHL
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