| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1211 |
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| Symbol | |
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| ID | 6115446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1546053 |
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| End bp | 1547480 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632695 |
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| Product | peptidase M23B |
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| Protein accession | YP_001759599 |
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| Protein GI | 170725573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases
[COG3061] Cell envelope opacity-associated protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0168861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0255188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGG TTATAACATT ATTAAAATTG CTTCCAAAAA TGCATCAAAT ATTGCTGACT
GTTTTAGTTT CCGTAACCTT AATTATTTTA GTTTTACCAG CAGATGATGC CCAAGCATCT
AAAAATGCTA ACAGCCAACT CTCTGGCACT ATTGAACTTA ACCATCTTGA TGAGTCGACT
ACAACAACCT CTGAATTCAA TAATCAAGAC AAATTAAAAG TCCCGTTAGC TTTTCGTACC
CCGACGCCGC CTAGTTCTGC CAGCGTCATT CCCAAAATGA ATGATGAAGC TAATCTAGTT
AAACCTGAAG TTTCAATTGC TGCTCTGAGG GCGGAAAAAG TTGAACAAGA TCATACAGAA
ACTTTCAAAG TAAAAAGTGG TGACACTTTA GCCGCTCTGT TTAAACGTGC CGACCTTAGC
GCACGAGATG TTTATGAGAT AACCCTGCTT CCCAAAGCCA AAAAGCATCT GCTTAAGATT
ATGCCGGGGC AGGAGATAAT GATATCCAAG AGCAGCGAGG GTGAATTTAC TCAACTTAAA
TTCCACTTAG ATCCAGTGTC TACGTTAGTT ATCAACAAAG ACGACAAAGG ATACGAAGAG
AAGGTCGTTA ATAAACAGAT TGAGAGCCGC ACTAAATTTG CTAGTGCCAC TATCAGCAGT
AATTTTTGGA ATGCAGGTGT CGGCGCAGGT TTAACCCCCA ACCAGATCAT GCAGCTTGCA
ACTATCTTCG GCTGGGATAT CGATTTTGCC TTAGATCTCA GAAAAGATGA CAACTTCTCC
ATTATCTTTG AAGAGGAGTT TGCCGATGGC AAGTTCCTGC GCAATGGCAA CATTCTTGCC
GCAGAGTTTG TGAATCAAGG CGATCGTTAT ACGGCGGTAC GTTACACAGA CGGTAACTAC
TACTCAGAGG AGGGACGCAG CATGCGTAAA GCCTTCCTTC GCTCCCCAGT TGATTTTAAA
TATGTCAGCT CTAGTTTTAA TCCCAAACGT CTTCACCCTG TCACAGGTCA AGTCAGAGCC
CATAGAGGGG TCGATTATGT TGCCGCTGTC GGCACACCAA TCAAAGCTGC GGGTAAAGGC
AGAGTGATAA AGTCTGCTTA CAACAAATAC AATGGTAACT ACGTATTTAT TAAGCATAAC
GACACCTATA CCACTAAGTA TCTGCACCTT AAAAAACGTA AGGTTAAACA GGGACAAAGT
GTTAAGCAGG GACAGATAAT TGGTACTTTA GGGGCAACAG GGCGAGTAAC AGGTGCTCAC
CTACACTACG AGTTTATCGT TAATGGCACC CATAGAAACC CGCGAACCGT AAAACTGCCA
AAGTCTCTAC CCATCGCAAA TAAAGAAAAG CCGGCATTCC TGGCTCTCAG TAAACAGATA
ATGGCTAAAC TTCAACAGAA CAAACAGGTA CAACTTGCAT CGCAATAG
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| Protein sequence | MGKVITLLKL LPKMHQILLT VLVSVTLIIL VLPADDAQAS KNANSQLSGT IELNHLDEST
TTTSEFNNQD KLKVPLAFRT PTPPSSASVI PKMNDEANLV KPEVSIAALR AEKVEQDHTE
TFKVKSGDTL AALFKRADLS ARDVYEITLL PKAKKHLLKI MPGQEIMISK SSEGEFTQLK
FHLDPVSTLV INKDDKGYEE KVVNKQIESR TKFASATISS NFWNAGVGAG LTPNQIMQLA
TIFGWDIDFA LDLRKDDNFS IIFEEEFADG KFLRNGNILA AEFVNQGDRY TAVRYTDGNY
YSEEGRSMRK AFLRSPVDFK YVSSSFNPKR LHPVTGQVRA HRGVDYVAAV GTPIKAAGKG
RVIKSAYNKY NGNYVFIKHN DTYTTKYLHL KKRKVKQGQS VKQGQIIGTL GATGRVTGAH
LHYEFIVNGT HRNPRTVKLP KSLPIANKEK PAFLALSKQI MAKLQQNKQV QLASQ
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