| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1206 |
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| Symbol | |
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| ID | 6115441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1537405 |
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| End bp | 1538103 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641632690 |
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| Product | aquaporin Z |
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| Protein accession | YP_001759594 |
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| Protein GI | 170725568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0161094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0014021 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATGA CTCAAAAAAT GGCTGCTGAA TTTATTGGTA CCCTTTGGCT TGTTTTAGGT
GGGTGTGGCA GTGCCGTTAT CGCCGCCGCT TTCCCCGAAG TTGGAATAGG TCTGTTAGGC
GTGGCATTTG CCTTCGGCCT AACGGTACTC ACTATGGCCT ACGCTGTTGG CCATATCTCT
GGTTGTCACC TTAACCCAGC CGTCTCTTTT GGCCTATGGG CTGGCGGGCG CTTTCCCGCC
AATGAACTTA TCCCCTATAT TATCGCTCAG GTAGCAGGTG GTATTGCTGG CGCTGGGATC
CTATATCTAA TCGCATCAGG TAATGCTGAT TTCAGCCTAG CCGACGGATT TGCGTCAAAT
GGTTACGGTG CACATTCACC AGGCGGTTAC ACCATGACCT CAGCCTTAGT TACTGAGATA
GTCATGACGC TATTCTTCCT GCTAATCATT TTAGGTGCTA CCGATGCTCG CGCTCCACAA
GGCTTTGCTC CTATCGCTAT CGGTCTGGGA CTCACCTTAA TCCACCTTAT CAGTATCCCG
GTTACTAACA CATCTGTGAA CCCGGCTCGT AGTACAGGTC CAGCGCTCTT TGTCGGTGAT
TTGGCTATCT CTCAACTCTG GCTATTTTGG GTTGCTCCTA TCGCAGGCGC CATTATTGCA
GGCTTCATCT ACAAGTTCTT CAACACTAAA GAGAACTAG
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| Protein sequence | MNMTQKMAAE FIGTLWLVLG GCGSAVIAAA FPEVGIGLLG VAFAFGLTVL TMAYAVGHIS
GCHLNPAVSF GLWAGGRFPA NELIPYIIAQ VAGGIAGAGI LYLIASGNAD FSLADGFASN
GYGAHSPGGY TMTSALVTEI VMTLFFLLII LGATDARAPQ GFAPIAIGLG LTLIHLISIP
VTNTSVNPAR STGPALFVGD LAISQLWLFW VAPIAGAIIA GFIYKFFNTK EN
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