Gene Swoo_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1202 
Symbol 
ID6115437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1534803 
End bp1535708 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID641632686 
Producthypothetical protein 
Protein accessionYP_001759590 
Protein GI170725564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.61051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000275192 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAATT ATCATCGTTG GGTCGATCGT ATGCAAATGA TTGAGCGCAA GATCAGACCA 
TCGAGTGTGT ACCTCTTATT TCTCGTCTTG GTCGCGTTTG CCCTTGGTGG CTTGAGCATG
AGTCTCTGGT TCGATAATAA TCAACCTAAA GCCCAGAGTA ACACAGATGA GATTCAAAAA
TGGACTCGAG AGCTTAATGC TCAGGCTCAG GTGCTTGCGT CTAGGAATTT AGAGTTAGTG
CTGGAGCGGG AAACTAGCGA TAAGATGCAG CAGATGTTTG CCGAGCAGCA CCATAAACAG
CGTGAGTTGG AGCGAGAGCT AAACTTCTAT CGTAGCATTA TGGCGCCAGA GAGCAGTGCC
GACGGTGTGA CGATTGAGGC CATTGAGTTA ACTCCAAGTA TATTGCCAAG GCAGTACCGC
ATTCAGCTTA TTCTTACTCA GCTGCAGAAA CGTAAGCAGT CGTTAAAGGG CAAGTCATCG
ATCATCTTGG TTGGCCAGCA GGCGGGTAAA GTTGTTGAGT TAGATGTCGC TGAACTGCTG
GGCGATAAAA AAGTGTTTGA TTTTAAGTTT CGCTATTTTC AGATCTTAGA GGCTGAAGTC
ACCTTGCCTG AAGGGTTTGA ACTCTCTCGG GTAAAAGCCA AGGTTAGCGT CCCTTCGAGC
CGTTGGACTA AGGGCTCAGA GGCAGAAGTT GAATACAGTG CGCAGCAACT TCTGCCGCAA
TTGGCGACAG CCGACAAGAG TGCTGACGAT GCAGACATTA AAGAAGCGTT GAAAAATACA
CTAGAATCTA AAGAGCCGGA GGAGGATAAT ACACCAAAGC CTGAGGGGGC AATCCAGACC
TCCGCTGCTG CTGAGGCATT ATCTGCGAGT GAGAAAACAG ATAATGGTGA GTCTGTCAGC
GAATGA
 
Protein sequence
MSNYHRWVDR MQMIERKIRP SSVYLLFLVL VAFALGGLSM SLWFDNNQPK AQSNTDEIQK 
WTRELNAQAQ VLASRNLELV LERETSDKMQ QMFAEQHHKQ RELERELNFY RSIMAPESSA
DGVTIEAIEL TPSILPRQYR IQLILTQLQK RKQSLKGKSS IILVGQQAGK VVELDVAELL
GDKKVFDFKF RYFQILEAEV TLPEGFELSR VKAKVSVPSS RWTKGSEAEV EYSAQQLLPQ
LATADKSADD ADIKEALKNT LESKEPEEDN TPKPEGAIQT SAAAEALSAS EKTDNGESVS
E