Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1202 |
Symbol | |
ID | 6115437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1534803 |
End bp | 1535708 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632686 |
Product | hypothetical protein |
Protein accession | YP_001759590 |
Protein GI | 170725564 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.61051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000275192 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAATT ATCATCGTTG GGTCGATCGT ATGCAAATGA TTGAGCGCAA GATCAGACCA TCGAGTGTGT ACCTCTTATT TCTCGTCTTG GTCGCGTTTG CCCTTGGTGG CTTGAGCATG AGTCTCTGGT TCGATAATAA TCAACCTAAA GCCCAGAGTA ACACAGATGA GATTCAAAAA TGGACTCGAG AGCTTAATGC TCAGGCTCAG GTGCTTGCGT CTAGGAATTT AGAGTTAGTG CTGGAGCGGG AAACTAGCGA TAAGATGCAG CAGATGTTTG CCGAGCAGCA CCATAAACAG CGTGAGTTGG AGCGAGAGCT AAACTTCTAT CGTAGCATTA TGGCGCCAGA GAGCAGTGCC GACGGTGTGA CGATTGAGGC CATTGAGTTA ACTCCAAGTA TATTGCCAAG GCAGTACCGC ATTCAGCTTA TTCTTACTCA GCTGCAGAAA CGTAAGCAGT CGTTAAAGGG CAAGTCATCG ATCATCTTGG TTGGCCAGCA GGCGGGTAAA GTTGTTGAGT TAGATGTCGC TGAACTGCTG GGCGATAAAA AAGTGTTTGA TTTTAAGTTT CGCTATTTTC AGATCTTAGA GGCTGAAGTC ACCTTGCCTG AAGGGTTTGA ACTCTCTCGG GTAAAAGCCA AGGTTAGCGT CCCTTCGAGC CGTTGGACTA AGGGCTCAGA GGCAGAAGTT GAATACAGTG CGCAGCAACT TCTGCCGCAA TTGGCGACAG CCGACAAGAG TGCTGACGAT GCAGACATTA AAGAAGCGTT GAAAAATACA CTAGAATCTA AAGAGCCGGA GGAGGATAAT ACACCAAAGC CTGAGGGGGC AATCCAGACC TCCGCTGCTG CTGAGGCATT ATCTGCGAGT GAGAAAACAG ATAATGGTGA GTCTGTCAGC GAATGA
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Protein sequence | MSNYHRWVDR MQMIERKIRP SSVYLLFLVL VAFALGGLSM SLWFDNNQPK AQSNTDEIQK WTRELNAQAQ VLASRNLELV LERETSDKMQ QMFAEQHHKQ RELERELNFY RSIMAPESSA DGVTIEAIEL TPSILPRQYR IQLILTQLQK RKQSLKGKSS IILVGQQAGK VVELDVAELL GDKKVFDFKF RYFQILEAEV TLPEGFELSR VKAKVSVPSS RWTKGSEAEV EYSAQQLLPQ LATADKSADD ADIKEALKNT LESKEPEEDN TPKPEGAIQT SAAAEALSAS EKTDNGESVS E
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