| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1201 |
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| Symbol | |
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| ID | 6115436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1532996 |
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| End bp | 1534723 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632685 |
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| Product | chloride channel core |
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| Protein accession | YP_001759589 |
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| Protein GI | 170725563 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000459194 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACTGGA AGGCGCTTGT GCTCTATAGA CTGAAGAAAA CCCGAGCCAA ATGGCAGATA
TACCTAAAGT CTGATCTTAA AGATACGCTA TCTCAGGCTA AGATAAGCCT GCAGCTCTCT
ATACTCGCCT TATTGTTCGC CCTGATGGCA TCGGCTGTGA TCATCCTATT TCGCCTATTG
CTGCTGTGGA TCAACACCTT TACCGAAACC AGTGAGCTGG ATTTTACTGA GATAGTTGAC
GACTGGCGAG TCTTATTACC CCTAATCGGC TCAGTTTTAA TCTGGTTTGT CGCACGAATA
AGCTCTAAAC GCTACAAACG CATGGGAATA GCTTATGTTT TACACAGGGT AAAGCTCCAC
TACGGCAAAC TCCCTCTGCA ATCTGCACCC AGTCAATTTT TTCAGGCGCT ATTCGCTTTA
GCCACCAACT TCTCAGTCGG TCGAGAGGGG CCCGTCATCC ATCTGGGCGC AGTCACAGCC
AGTGTATTGG CCGAAAAATT TAAACTGCCG GACAACAGCG TACGCATTAT GTGCGCCAGT
GGCATCGCCG CAGGTATCGC TGCCACCTTT AATACCCCAC TAGCGGCTGT GATTTTTGTA
TTTGAAGTTG TCCTGCGCGA ATATAAAGTT CACTACTTTT TCCCCATTAT CATTGCCGCT
ATCTGTGGCA CTGTGACAAA CCAGTTGGTG TTCGGCAACA TACATGAATA TGATCAGATA
GGCATAACCC ATATCCCCTT CACCCAATAC CCAATATTGG CAATCTGTGG GCTAATCTTG
GGTTGTATCG CAGCGCTATT TAACTCATCA CTTTTAAAGG TCACTCAAAC AGGCCAGAAC
TGGCCATTGA TATATCGGGT TCTGCTCGCG GGTATCGTCA CAACGATCGT AGGTATCTTC
CTGCCTGAAG CGCTTGGCAG TGGTGATCTT GCTATCGACC AAGCGATCAG TGATCACCCA
AGTATTCTCT TTTTAAGCGC ACTTTTAATT GGCAAAATCA TCGCCACTAT CGCTGCTATT
GGGCTCGGTA TTCCTGGTGG GATCATCGGC CCGCTGTTTG GAATAGGCGC TCTGATTGGT
GCCATCTTAG CCCTATTCAG TGCTCTGCTA TTTCCCTCTA TTGCCCCCTA TATCGGCCTT
TACACCATCA TAGGTATGAC AGCTATTATG GGGGTGTGTC TCAGTGCGCC ATTGGCAGCG
CTGGTCGCCC TACTCGAGAT GACCAATGAC CCCTCGATTA TACTGCCAGC CATGTTCGTC
AGTATTCCGG CCTTTCTGGT CGCTCATCAG GCCTTCAACA CTCAATCTCT CTTTCTCAAA
CAGTTAGACA TTATGGGATT AGACTATCGC GTCTCTGCGG TTGAACAAGC ACTACAGAAA
ATAGGTGTAC GAGCCCTAAT GGACAAACGT ATGGTGATTG TCACCGATAA CGATGAACTC
CTGCTTGAAG TGCTTAAACG AGCCGAAGGC CGTTCAGTGC TGGTACGCAA CGCCCAAGGA
CAGATGGAGA TGCTACAACT TGAGATGCAA CTTGCCGATG AGGAGAGCGC ACTCACCCGC
CACCCTATCG AAGGCTTACC CGATACCGCC ACCCTAAATG AGGTTTACGC CATCCTCTCA
AAAGAGCGGC GTGGCGAGGT CTACATCTAC CAAGAACAAA AAGAGAAAAT AGTCGGCGTT
ATCGGTTGGG GCGCATTGCA AAAAGAGATA CGTTCAGGGC AAGTTTAA
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| Protein sequence | MYWKALVLYR LKKTRAKWQI YLKSDLKDTL SQAKISLQLS ILALLFALMA SAVIILFRLL
LLWINTFTET SELDFTEIVD DWRVLLPLIG SVLIWFVARI SSKRYKRMGI AYVLHRVKLH
YGKLPLQSAP SQFFQALFAL ATNFSVGREG PVIHLGAVTA SVLAEKFKLP DNSVRIMCAS
GIAAGIAATF NTPLAAVIFV FEVVLREYKV HYFFPIIIAA ICGTVTNQLV FGNIHEYDQI
GITHIPFTQY PILAICGLIL GCIAALFNSS LLKVTQTGQN WPLIYRVLLA GIVTTIVGIF
LPEALGSGDL AIDQAISDHP SILFLSALLI GKIIATIAAI GLGIPGGIIG PLFGIGALIG
AILALFSALL FPSIAPYIGL YTIIGMTAIM GVCLSAPLAA LVALLEMTND PSIILPAMFV
SIPAFLVAHQ AFNTQSLFLK QLDIMGLDYR VSAVEQALQK IGVRALMDKR MVIVTDNDEL
LLEVLKRAEG RSVLVRNAQG QMEMLQLEMQ LADEESALTR HPIEGLPDTA TLNEVYAILS
KERRGEVYIY QEQKEKIVGV IGWGALQKEI RSGQV
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