Gene Swoo_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1187 
Symbol 
ID6115422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1519574 
End bp1520242 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content45% 
IMG OID641632671 
Producthypothetical protein 
Protein accessionYP_001759575 
Protein GI170725549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000506322 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTGATAT TTCATATTAC TGCAGGAGCG ATTGCGCTTC TCTGCGGAAT AACAGCCTTA 
ATTAGCCGTA AAGGCACTAA AGTACACAGA ACTGCTGGTA ATGGCTTTTT CTTCGCCATG
ATGACCGTCG CCGCAACTGC TATCTATCTT GATGCGGTGA AGATGGAGTT ACCTGTAATG
GGGATTTTGA CTGGCTATAT GGCCTCCACC TCTTGGATGG CAATCAAGAG ACCTGAAGGT
AGCCTAGGCC TGTTCGACAA ACTCGCCTTC GCGACGATCA CAACCCTAGC CGCCACTCTA
TTTATCTTAG GCTCACTTGG GGTCTCACCG GGAACAAACA TCCCCTCCGC CTTCTTCTAT
ATTTTCGGTT CTGTCGCCGC GTTTGCCGCA ACCTTAGATC TTATCATGCT GCTCAAGGGT
GGGGTCTATG GAAAACACAG AGTCGCACGT CATCTATGGC GTATGTGTAT CGCCATGATC
ATGGCCACTA TGTCATTTCT AGCTCAAAAA GCTGCTATTC CAGAGGTGTT ACATGGATCT
TCTCTGTTAT GGATGCCAGT ACTTTTACTG TTCATTTTTA TGTTCTATTG GCTAATTAAG
ATGATATTTA GCAAGAGATA TCAAGTAAGA GTAAATAGAG CCGAGGTCGA ACAGCATCAA
GGAAAATAG
 
Protein sequence
MLIFHITAGA IALLCGITAL ISRKGTKVHR TAGNGFFFAM MTVAATAIYL DAVKMELPVM 
GILTGYMAST SWMAIKRPEG SLGLFDKLAF ATITTLAATL FILGSLGVSP GTNIPSAFFY
IFGSVAAFAA TLDLIMLLKG GVYGKHRVAR HLWRMCIAMI MATMSFLAQK AAIPEVLHGS
SLLWMPVLLL FIFMFYWLIK MIFSKRYQVR VNRAEVEQHQ GK