| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1186 |
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| Symbol | |
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| ID | 6115421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1518004 |
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| End bp | 1519542 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632670 |
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| Product | amidohydrolase |
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| Protein accession | YP_001759574 |
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| Protein GI | 170725548 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000825037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGGCTAT CACTATTGAA AAAGTGGCTA TTTGGATCAG TGCTATTTTT ACCGCTTGCC
AGCTTAATCA CTTACACTTG GGTCGAATAT CAGATGACAC AAAGAGCGGG AGCTCATACG
CAAATCATAG AGCGTGAGCA GTTCTCCCCC ACAAGCGGTC CCATATTAAT CGAAAATGTG
AACCTGCTTT CTGCTGATGG TTTAACCATG CTCCCAGACC AATCAATCCT GCTTGAGAAT
GGAAAAATAG CCCATATTAA TCCACCTCAG GAGCGCGTAG ATAGCCTCTT AAATAACCCC
TTAATAGTCG ATGGTAGTAA CAAATACCTT ATTCCGGGGC TCGTCGACTC CCATGTTCAC
CTAGAGAGGA GCCCTAACGA TCTATTACTC TACCTAGCAA ACGGCATCAC CTATATTCGT
GATATGGGCG GCGTCCCTGA ATACGTAGCG TGGCGAAAAC AGATCAGAGA GGATTTAATC
GGTCCCGATA TCTTTATCGC CTCAGAGAAG GTCAACAGCC TAAGCGGCAT CGAAGCACTC
TTTAATAGCT GGACACGAAC CCGCATCAAT GTCTCAACCC ATGAGCAGGT AAACAAGCTC
GTTAAATCCT TGGTAGACGA CGGCTTTGAC GCCATAAAGA TAAGCAGCTT TATCAATGAG
GAGATCTACC ATCAGCTGCT CGATTCAGCC AAAGCAGCTG GACTGCCAAC AGTTGGCCAC
CTCCCCTACT CCATCGGACT TAACGGCTTA TGGCATTCGG GGCAAACAGA GCTTGCCCAT
GTAGAGGAGA TAACCAAAGC ACTCAGTGAA GACTTTGGCG GCTATCACCA TGATCGTGCA
GAGCAATACT TAAGTTACGT TGAGATGCGT AGCAATAGAG TGGCGAGAAA ACTAAAGGAG
AAGCAGATAG CGGTTACCTC ATCAATCTGG CTTATGGAGA GCCTGACGAG ACAAAAATTT
GCACTCACAC CTTTATTAAA AGAGATAGCC CTTCCCTACG CCAACCCAGG AATTGTGGAA
GGTACAGTGC TAGCCAAAGG TTGGCTACCG GGCCATAACA GCTACCAGCT AAGCCAAGAG
ACTCTCGGCG ATCCTCAAGC CGTTGAGCGT TCAAAGCGAT TTTGGCAGAC CTACGTAAGC
GCGATCCACA TTATGACTCA AGCGCTTAAT AACAATGATG TACTCTTTAT GGCCGGAACT
GATGCCAATA CCGCCGCTGT GGTTCCGGGG TTCTCACTCC ATGATGAACT GAACTCGTTA
ACTCAAGCGG GACTTAGCAA TGCTCAGAGT CTCTACTCTG CAACAGCCGC TCCCGGAGAG
TGGATGAGGA GTAACACAGG AAAGATAAAG TCAGGTTACC GGGCAGATCT TGTTTTGCTC
GATAGTAACC CACTACTTGA TATCAATAAC ACCCGCAGCA TTAACGCCGT ATTCAGAGAG
GGCAGAATGT TTGACCGCGC TCAGCTAGAT GCCATGTTAG CCGAAGTTCT TAGGGTCAAT
GACAAAGCCC GGCATCAAGG GATTAACCAG TTTAATTAA
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| Protein sequence | MRLSLLKKWL FGSVLFLPLA SLITYTWVEY QMTQRAGAHT QIIEREQFSP TSGPILIENV
NLLSADGLTM LPDQSILLEN GKIAHINPPQ ERVDSLLNNP LIVDGSNKYL IPGLVDSHVH
LERSPNDLLL YLANGITYIR DMGGVPEYVA WRKQIREDLI GPDIFIASEK VNSLSGIEAL
FNSWTRTRIN VSTHEQVNKL VKSLVDDGFD AIKISSFINE EIYHQLLDSA KAAGLPTVGH
LPYSIGLNGL WHSGQTELAH VEEITKALSE DFGGYHHDRA EQYLSYVEMR SNRVARKLKE
KQIAVTSSIW LMESLTRQKF ALTPLLKEIA LPYANPGIVE GTVLAKGWLP GHNSYQLSQE
TLGDPQAVER SKRFWQTYVS AIHIMTQALN NNDVLFMAGT DANTAAVVPG FSLHDELNSL
TQAGLSNAQS LYSATAAPGE WMRSNTGKIK SGYRADLVLL DSNPLLDINN TRSINAVFRE
GRMFDRAQLD AMLAEVLRVN DKARHQGINQ FN
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