| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1184 |
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| Symbol | |
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| ID | 6115419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1516995 |
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| End bp | 1517459 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632668 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_001759572 |
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| Protein GI | 170725546 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000438605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACTGATG TAATTTTTAA CAATACACGT TTCGACCCCG ATTTAACTCC TTTTCATGAG
CATGCTAAAC AGATGGCAAA AGCCTTTGGC TATACTGCTG CTTTGGATTT TGATAAAAAC
CTAGCTCAGC TTGTGCGCTT GCGAGTGGCG CAAGTTAATC AGTGCTCCTA TTGTTTGATT
TTGCATAGCA AAACAGCGAG AGAGGTGGGG ATCGAGCCCG CTAAAATAGA TAATCTGGCC
AGTTACTGGG AGTCTGAACT TTATAGCGAG CAGGAAAAAG TGGCCTTGAG TTATTGTGAC
AGACTCACTC AGGGGACAGA TCCCCATTTT CATGAGATAC ACGAGCAAGC TAAGTGCTTT
TTTTCCGAAA AAGAGATAGC CGAGTTGGCG GCAATTGTTA TCAATATGAA CTTATGGACG
CGTTTAAAGC TAGCTCAAGG TGCAACTCCT AGCTACGCAG AGTAA
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| Protein sequence | MTDVIFNNTR FDPDLTPFHE HAKQMAKAFG YTAALDFDKN LAQLVRLRVA QVNQCSYCLI
LHSKTAREVG IEPAKIDNLA SYWESELYSE QEKVALSYCD RLTQGTDPHF HEIHEQAKCF
FSEKEIAELA AIVINMNLWT RLKLAQGATP SYAE
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