Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1183 |
Symbol | |
ID | 6115418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1515173 |
End bp | 1516699 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641632667 |
Product | hypothetical protein |
Protein accession | YP_001759571 |
Protein GI | 170725545 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000961174 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCAGGG TTACATTAAG GAAAATATTT GGAAGTGAAA TGGCTCAAGA AGACCCTGAC TTTCTCTCCT ACGCCATGCC CAGGAATGAT TACTTACTCC CTTTATCTGA TGAAGATAAC AAAGCCATAA TTCTCAATGC TGCTCGGGGT TCAGGGAAAA GCGGATTACT TATTTCATTA TCCGAGCACC TAAAAGGTAC TTCGAATACA AAAATAATTT CACTTGATTA CCGAGATATG GTTTTTCCCG TTGGGAAAAT ATCTGTTAAT GAATCTATTA ACTATTGGAA AAATACCATT CTTTCTAAAG TTGTTGCGGA AATAGGTACA AGCAAAGGCT GGGCTTTTAT TGATGATGAT ATCTGTGCCG TAGAGCTATC AGAAAACTAC GGAGTAAAGA GTAAAAACCT ACTAACATCC ATCCTATCTA GACTTAAATT CAAATCTAGT CCTATCGAAC GCTGCCAATT TGACTCAAAT ATCACGATTA AACAGCTCTC AAGAATCATA TCCGCATCCT CAATAAAATA TTGGATAATG CTAGATGAGA TGGATGATAT TTATGATAAT GGAGATGAGA TAAACCTACT CATCGGCCTG CTTCAAGTTG TCGCCTATTT AGGAGTAAGA ATTCCCAATA TATGGGTTCG AGTCACGATT CGTCCCCATA TTCTGACATT ATTAAGAACA ACCAATGGAA CGATTCAAAA ATTAAACGAA TATGAACTTA ATCTCTCTTG GAGTAAAGAG CAGATAAAGG AGGTACTGGC AAGAAGGTTA GATTTCTATC AAAGAAATAA CTCTAACGAA GACCAACTTG AACTAACACT TTCTGAGCCT AATGCCCTAA GTGATAAATC CATAGAAACC TCAAAACTCA TTTCAACCTA CTTTGAAGAT TTTGATATGG GATTTTCGGT TGGTTCAACC TCTAATTATC GAGCTTTCGG TACACTTTGT TTTTACCGCC CTAGATGGCT TATTGAATAC TGTAAAGAGG TAAGAAAAAT AACAACTGAA AGCAAGAGAA GTAATCTGTA TCACTATAAA AGGGCTTTTC TTCCATTTGG AAACAGAAGA ATACAGTTTA TATCTGGGGA GTTTTCTAAA ACAATCCATT ATATTCATGC TGCGTTGAAC GCCCTAATTG CGCTGGACGT ATCAGGATTT GGAACCTCAA AAAAATTTAG ATCTGTCATT GTTAATCAGA TTATAAAAAC TGGGATAGTA CAAGCAGAAG AACATGAATA TCATAGAGTT GCATTAGATA TCGCAAAGAA CTTATACATA ACTGAATTTG TAAGAGGAAA AGTGCGGGTC GACGGTGCGG GGGGTTATCA TCGTTTCTAC TACTATAATG ATCGACCCGA TCTACTCAGC TCCTGGCAGC AGGACAAAAA TATCCATTGG GAGATACACC CTACATTTCA AAGAGCATTT GATTTAGAAG ATAGCCAAGT GTACAAGATT TCTGAAGATG TCAAAATAAT AGGAAATAAG CATCAAGATA AAGAGGGTGC AACCTAA
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Protein sequence | MSRVTLRKIF GSEMAQEDPD FLSYAMPRND YLLPLSDEDN KAIILNAARG SGKSGLLISL SEHLKGTSNT KIISLDYRDM VFPVGKISVN ESINYWKNTI LSKVVAEIGT SKGWAFIDDD ICAVELSENY GVKSKNLLTS ILSRLKFKSS PIERCQFDSN ITIKQLSRII SASSIKYWIM LDEMDDIYDN GDEINLLIGL LQVVAYLGVR IPNIWVRVTI RPHILTLLRT TNGTIQKLNE YELNLSWSKE QIKEVLARRL DFYQRNNSNE DQLELTLSEP NALSDKSIET SKLISTYFED FDMGFSVGST SNYRAFGTLC FYRPRWLIEY CKEVRKITTE SKRSNLYHYK RAFLPFGNRR IQFISGEFSK TIHYIHAALN ALIALDVSGF GTSKKFRSVI VNQIIKTGIV QAEEHEYHRV ALDIAKNLYI TEFVRGKVRV DGAGGYHRFY YYNDRPDLLS SWQQDKNIHW EIHPTFQRAF DLEDSQVYKI SEDVKIIGNK HQDKEGAT
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