| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1182 |
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| Symbol | |
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| ID | 6115417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1513800 |
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| End bp | 1515098 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632666 |
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| Product | ammonium transporter |
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| Protein accession | YP_001759570 |
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| Protein GI | 170725544 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000100846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATGGA TGATATTGAG TTTCCTTATT GGCCTTAGTT GTTTCTCTTT CCCTGCTTTG
GCTGAAGAGA GTGCATTTAA TGGCGCTAAT ACTGCGTGGG TATTAAGCTC ATCGGCACTG
GTTCTATTGA TGACCTTGCC TGGACTTGCC CTATTCTATG GCGGGCTAGT ACGCAGTAAA
AATGTACTTT CTGTACTGAT GCAGTGTTTC TCTATTGCGG GGCTAGCCTC GGTACTCTGG
TTTGTGATCG GGTACTCGCT TGCATTTGAT AGTGGTAATG GTTTTATTGG GGGACTGGAC
AAGGTGATGC TAGCAGGAAT GGGCCGAGAT GATCTCTCTG GCGATATTCC TGAACCTCTA
TTTATGTTGT TCCAGATGAC TTTCGCCATT ATCACGCCCG CTTTAATTAT CGGTGGCTTT
GCCGAGCGAA TGAAGTTTTC GGCTGTGATG CTGTTTTCTG GCGCTTGGTT GCTTTTAGTT
TACGCTCCTA TTACCCACTG GGTGTGGGGT GGCGGCTGGT TAGCAGAGTT AGGCTTATAT
GATTTTGCTG GGGGAACGGT TGTCCATATC ACAGCTGGTG TTGCCGCTCT GGTTGCTGCA
AAAGTGCTAG GACCCCGTAA AGGTTTTCTC AACTCAGCGA TTATGCCTCA CAACTTGACG
ATGACCGTTA CCGGCGCGGG CATGTTATGG GTTGGCTGGT TTGGCTTTAA TGGCGGCAGT
GCACTTGGCG CGAATGGTAG TGCGGCTATG GCTATTTTGG TTACACACCT TGCAGCGTCG
ATGGGCGCCA TGACTTGGGC GGCCATTGAG TGGATAAAGT TTGGTAAACC CAGCGCGTTA
GGAGTCGTAA CCGGTATGGT GGCGGGTCTA GGCACTATCA CACCTGCTTC GGGTTATGTT
GGGCCAGGTG GCGCACTGAT CATTGGCCTT TTAGGCGGCA TGGTATGTTT CTACGCGACG
GTTTATATCA AACAAAAGTT AAGGATCGAT GATTCATTGG ATGTTTTTCC AGTGCACGGT
GTTGGCGGTA TTTTAGGTAC CTTGTTAGCG GGGGTCTTTA GCTCAACTCA GTTAGGTGTA
TTTAGTGGTT ATGGGTTTGC CGAAGGTAAT GAGACCATGT TAGATCAACT TGGGGTTCAG
CTTATCGGTG TTGTCGCGAC CTTTGCTTAT ACCGCGATTG TCTCTTGGGT ACTCTTTGTG
ATTATCGGTA AATTAGTTAA TGGCTTAAGG GTCAGTAGCG AGCAAGAGAT CACAGGTTTA
GATCAATCAG AACATGAAGA GAGCGGTTAT ATTTTGTAA
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| Protein sequence | MKWMILSFLI GLSCFSFPAL AEESAFNGAN TAWVLSSSAL VLLMTLPGLA LFYGGLVRSK
NVLSVLMQCF SIAGLASVLW FVIGYSLAFD SGNGFIGGLD KVMLAGMGRD DLSGDIPEPL
FMLFQMTFAI ITPALIIGGF AERMKFSAVM LFSGAWLLLV YAPITHWVWG GGWLAELGLY
DFAGGTVVHI TAGVAALVAA KVLGPRKGFL NSAIMPHNLT MTVTGAGMLW VGWFGFNGGS
ALGANGSAAM AILVTHLAAS MGAMTWAAIE WIKFGKPSAL GVVTGMVAGL GTITPASGYV
GPGGALIIGL LGGMVCFYAT VYIKQKLRID DSLDVFPVHG VGGILGTLLA GVFSSTQLGV
FSGYGFAEGN ETMLDQLGVQ LIGVVATFAY TAIVSWVLFV IIGKLVNGLR VSSEQEITGL
DQSEHEESGY IL
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