| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1179 |
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| Symbol | |
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| ID | 6115414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1511469 |
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| End bp | 1512170 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632663 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001759567 |
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| Protein GI | 170725541 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000907679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCTAGATT CATTTATCTC AGTGCTTACC GCCCTGTGGC AACAAGATTT TGCCCTACTG
CAAAGTCCCG GCAGCGCAGC AATGATCTAC TTATGTATCT TTTCACTTAT CTGGCTTGAA
AGCGCGCTTC TACCCGCAGC ACCTATGCCC TGTGACAGTG TCGTTATTCT CTCCGGCAGC
TTAGCCGCAG CAGGCATCAT CAGTTTGCCT TTAACCTTTA CCATTTTACT GGTTGCAGCC
GCAACTGGCA GTTGGGTTGC ATTTCTACAG GGTCGCTGGT TACACAAGCT TCCCAAGATT
CAAAAATGGA TAGACGCAGT GCCTGAGCAC CGCATGAACA CTGTAGATAA GTTACTTAAT
CAACATGGGT TACTGGCACT TTTTACCGCC CGTTTTATCC CTGTAGTCCG TCCGCTATTA
CCGTTAATGA TGGGGTTACA CATAAAGAAA GTGACTCATT TCCACTACTT TGCTTGGTTA
AGTGCTGGGA TCTGGTGCGC CTTACTCATC GGTTTTGGCT ACTCTCTCTC CTACCTGCCA
GAGAAGATCG CAAAAGTGGT CACCATGGGG CTGATGATAG CGCCAGTGCT TACCTTAGCT
ATCGCCATCG TCAGCTTCTT AACCGGTTAT CTGCTTAAAA AGAGACGTGC TGTTAAGACT
CTTAAGCCAC TGACCCAACT TGATGATCGA TCACAAGTCT AA
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| Protein sequence | MLDSFISVLT ALWQQDFALL QSPGSAAMIY LCIFSLIWLE SALLPAAPMP CDSVVILSGS
LAAAGIISLP LTFTILLVAA ATGSWVAFLQ GRWLHKLPKI QKWIDAVPEH RMNTVDKLLN
QHGLLALFTA RFIPVVRPLL PLMMGLHIKK VTHFHYFAWL SAGIWCALLI GFGYSLSYLP
EKIAKVVTMG LMIAPVLTLA IAIVSFLTGY LLKKRRAVKT LKPLTQLDDR SQV
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