| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1171 |
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| Symbol | |
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| ID | 6115406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1504232 |
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| End bp | 1505518 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632655 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_001759559 |
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| Protein GI | 170725533 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000102166 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCCGTT CCGACGAACT ATTTGAACAG GCTAAAAAAA CCATCCCAGG CGGTGTTAAC
TCACCAGTAC GTGCTTTTAA TGGCGTAGGT GGTTCACCTC GCTTTATTGA TAAAGCTGAT
GGCGCCTATA TCTATGATGC TGACGGCAAA GCTTACATCG ATTATGTGGG TTCTTGGGGC
CCGATGATCT TAGGCCACAA CCACCCAAAA ATTCGTCAAG CAGTATTAGA AGCCGTTGAA
AATGGTCTCT CTTTCGGTGC GCCAACAGAA CTTGAAGTCA AGATGGCTGA GAAAGTTATC
GAGATGGTTC CTTCAATGGA ACAGGTTCGT ATGGTGAGTT CAGGAACTGA AGCAACCATG
AGCGCTATTC GTCTTGCTCG TGGCTTCACT AACCGTGACA AAATCCTAAA ATTTGAAGGT
TGCTACCACG GCCACGCTGA CTGTCTATTG GTCAAAGCAG GTTCTGGTGC ACTGACTTTA
GGTCAACCTA GCTCTCCAGG GATCCCTGAA GATTTCGCTA AGCACACGTT AACGGCAACC
TATAACGAAC TAGAGTCGGT AAAGACCCTG TTTGAACAGT ACCCAGAAGA GATCTCTTGT
ATCATTCTTG AGCCTGTCGC TGGCAACATG AACTGCATTC CACCTGTAGA GGGTTTCCTT
GAAGGTCTAC GTGCTATCTG TGATCAGTAT GGTGCACTGC TTATTATCGA TGAGGTAATG
ACAGGTTTCC GTGTATCTAA GAGCGGCGCT CAAGGTCACT ACGGTATTAC ACCTGACCTA
ACAACACTAG GTAAAGTCAT TGGCGGCGGC ATGCCAGTTG GCGCATTTGG CGGACGTAAA
GATGTGATGC AGTTCATCGC ACCTACCGGC CCTGTTTATC AAGCAGGTAC TCTCTCTGGT
AACCCAATCG CGATGTCTGC GGGTCTTGCC CAGATGGAAG AGTTATGTGC AGAGGGGTTG
TATCAAGAGT TAGCCGCTAA GACTAAACGC ATTGCCGAAG GCTTTAAAGC TGCAGCAAAC
AAGCATGGCA TCCCTATGTC TATCAACTAT GTAGGCGGCA TGTTTGGCTT CTTCTTCACC
GAAGAGGAGA AGGTGACACG TTTCGATCAA GTGACCCAGT GTGATGCTGA GAAATTCCCT
GAATTCTATC ATGGCATGCT AGATGAGGGT GTTTACTTAG CCCCTAGCGC CTATGAAGCA
GGCTTCCTCT CTATGGCCCA TGGTGAGAAA GAGCTAGAAG AGACATTAGC AGCTGCTGAA
CGCGTATTCG CTAAAATGGC TAAATAA
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| Protein sequence | MTRSDELFEQ AKKTIPGGVN SPVRAFNGVG GSPRFIDKAD GAYIYDADGK AYIDYVGSWG
PMILGHNHPK IRQAVLEAVE NGLSFGAPTE LEVKMAEKVI EMVPSMEQVR MVSSGTEATM
SAIRLARGFT NRDKILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAT
YNELESVKTL FEQYPEEISC IILEPVAGNM NCIPPVEGFL EGLRAICDQY GALLIIDEVM
TGFRVSKSGA QGHYGITPDL TTLGKVIGGG MPVGAFGGRK DVMQFIAPTG PVYQAGTLSG
NPIAMSAGLA QMEELCAEGL YQELAAKTKR IAEGFKAAAN KHGIPMSINY VGGMFGFFFT
EEEKVTRFDQ VTQCDAEKFP EFYHGMLDEG VYLAPSAYEA GFLSMAHGEK ELEETLAAAE
RVFAKMAK
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