| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1169 |
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| Symbol | |
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| ID | 6115404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1502109 |
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| End bp | 1503356 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632653 |
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| Product | citrate transporter |
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| Protein accession | YP_001759557 |
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| Protein GI | 170725531 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0012522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000098919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCTCTACA TATTCCTTAT CTCTCTCGCC ATTCTGGCAC TGTTAAGTAT CATTTTCGAG
GAGGTAACCC ACCTCAACAA AGCCAAAACC ACCCTATTTT TTGGCTGTGT CTCTTGGATT
GCACTCTTTA TGTCAGCGGG AGATCCTGGC CATGAAAAGT TGATTGCAGC GGAGTTAAAT
GAAAACCTAC TTGAGATAGC TACGCTTTGG TTGTTCTTAA TGTCGACCAT GACCTTTGTC
GCCTACCTGA ACGCTAAGGG GATGATCCAG ATCTTGGTGC AAAAGTTGTT TCCACAGAAG
GTGTCAGTAC GGGTTTTAAT GCTGCAAGTC GCGCTATTCT CTCTTATTCT TTCGGCTATC
TGCGACAATG TCACCGCGAC GTTAGTGTCA CTGGGATTAC TAACCACCTT CAAGCTTGAT
AATCAGATGA GACGCAGAAT GGCAGTGTTG ATCATTTTCG CGGTCAACTC AGGGGGCGTA
TCACTAATCA CTGGGGATGT GACCACCTTG ATGATCTTCC TTGGAGGTCA TGTACAGATG
TCTGAACTAC TTATCCTCTT TGTACCTGCA GCGGTCAGTG TCATGTTACT TGCGGTATTG
TTCTCTCTCA AAGCCGAAGG TCATGTCAGC ACCACACCAA TCACACGTGA GTACCATAAA
GTTGATATTG TTATCGCCAT TATCTTCTTC TGTACGATTA TCGCGACAAT GGCATTGAAT
ATCCTATTTG GGATCCCGCC AGTGCTCACC TTCTTAACCG GTCTCTCAAT CCTATTTCTG
GTGGGACATA ACTTTCGAAG TAAAAAGGAG GAGATGGAGA TTCTGGAGTA CATTCGACAA
GTGGAGTATG ACACCCTGCT GTTCTTCCTA GGAATACTGC TACTCGTTGG AATGCTAAAG
GAGATAGGTA CATTAGATCT ATTAACAGAG GTCTATGCCA TGTATGACCC AAATATCTCA
AACTTTGTTA CCGGTATTGG ATCAGCCATC TTAGATAACG TGCCACTTAC CGCTGCTCTA
TTGAAAGCGG AACCGGTATT AACCACGGCA GAATGGTTAG GCTTAACCTA TTCAGTTGGC
GTCGGCGGGT CCCTACTGGT TATAGGCTCA GCATCGGGCA TTATCGCCAT GAGCAAGGTA
AAAGAACTGA CCTTTGTCAG CTACCTTAAA TATGTTCCTG CGCTACTGCT CTGCTACAGC
TTAGGTTATG GTTTAACTCT CTTTATCGCC AATCATCTTC ATGGTTAA
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| Protein sequence | MLYIFLISLA ILALLSIIFE EVTHLNKAKT TLFFGCVSWI ALFMSAGDPG HEKLIAAELN
ENLLEIATLW LFLMSTMTFV AYLNAKGMIQ ILVQKLFPQK VSVRVLMLQV ALFSLILSAI
CDNVTATLVS LGLLTTFKLD NQMRRRMAVL IIFAVNSGGV SLITGDVTTL MIFLGGHVQM
SELLILFVPA AVSVMLLAVL FSLKAEGHVS TTPITREYHK VDIVIAIIFF CTIIATMALN
ILFGIPPVLT FLTGLSILFL VGHNFRSKKE EMEILEYIRQ VEYDTLLFFL GILLLVGMLK
EIGTLDLLTE VYAMYDPNIS NFVTGIGSAI LDNVPLTAAL LKAEPVLTTA EWLGLTYSVG
VGGSLLVIGS ASGIIAMSKV KELTFVSYLK YVPALLLCYS LGYGLTLFIA NHLHG
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