| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1167 |
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| Symbol | |
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| ID | 6115402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1499422 |
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| End bp | 1501038 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632651 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001759555 |
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| Protein GI | 170725529 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00110256 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000320239 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAAGG CGTTTTTTGG ATTAAGCGAT AACCCTTTTT CTATCGCACC CAACCCCCAT
TATCTGTTTC TCAGCGATCG CCATCGTGAA GCATTAGCAC ATCTAACTTA TGGTTTAGGC
GACACGGGGG GCTTTGTTCT GCTAACTGGA GAGGTCGGAA CAGGTAAAAC TACCGTCTCT
CGCTGCTTGC TCAATCAACT GCCGGAGAAT ACCGATACCG CTTTTATTCT CAATCCCTCT
CTTACCGAGC TCGAGTTACT TGCCACCTTA TGTGATGAGC TTTCAATTGA GTATGAGAAA
GAGCCGACAC TGAAGCAGTT AACGGATCTG TTGAGTAAAT ACCTGCTGGC TAATCATGAA
AAGGGACGCA ATACCGTTCT CATTATTGAT GAAGCCCAAC ATCTAAGAGC CGAAGTGCTT
GAACAGTTAC GTCTGCTAAC CAACCTTGAA ACCGATACCA AAAAGCTACT GCAGGTTATT
TTAATTGGTC AGCCTGAGCT TCAGCAGCTC CTTAAACGCC AAGAGCTACG CCAGTTGGCG
CAGCGGATCA CCGCAAGATA CCACTTGCTA CCATTGACGC CTGAAGAGGT AGGTTTGTAT
GTTCACCATA GGCTGCAAGT AGCTGGACGT CATGAGCCAC TGTTTAATAC GGGAGCCATT
AAAGCCTTAC ACAGATACAG TGGTGGTATT CCTCGTTTAA TCAATCTTTT ATGCGAACGC
GCGTTAATGG CGAGCTACGC TAAATCAAAA GTGCCCGTAG ATAAAAAGAT GGTGATCTCA
GCTTCAGCTG AAGTGCTGGG AGAGGAGATT AAGCAGACTA ACTACCTATT GCCAGCGGGT
ATCGCAGCGG CGGTGGGTTT GAGCTGTGTG TTAGGTTATC TGCTACTCAC AAAGCAGCAG
AGTGCAGTGA CGACGCCATC GGCCCAAGTC AGCCCAGTTG TTAAGCCTGA AGTTAGCACT
GAGCCTGTTA AAGCCAATCT CGAAAATAAG TTAGATGCAA GTCAGCGGGT GTTAAATGAT
GCGATTGCGA ATAGCCGCAA CATAGACACT GCCTATGCCA GTATTTTAGG TCTTTGGGGT
AAGGTGCCCT ATTTAGGCTT AAGTGCCTGT CAGTCTGCCG AACAACAGGG GCTTTCATGC
TTTCAGCAAC AGGGTAACTG GAACTCATTA ACCCGTCTTA ACTTTCCTGC TGTGGTGTAT
CTGGTCGATG GCCAAGATGA AGCATTTTAT GGCACGGTAG TATCAAGAAG TGGCGAGCAG
TTACTTCTCC AGCTTAATGA GCAGCAGCTT TGGGTCGACA GAGAGTGGTT TAACCGTCAC
TTTAGCGGCA CATTCGAGCT ACTCTGGCAG GCGCCAGATG AGCTGCCACG TGAGATAGGC
AAAGGCTCAA ATCCGGCGCA GATCCAGTGG CTGGAAAATA GCTTAGCTAA AATCGATAAC
ACAGCTCCTC GCCTAGTGAG TCGATTCGAT ATTCAGCTGG AGGAGCAGTT AAAGCGCTTC
CAGCGTAAAC ATGGATTGAG AGCCGATGCT ATCGCCGGCA GTCAGACATT GGTTCAGCTT
AATCTCTACT TGAGTGCCCA AGGGCCAAGG TTAATGCAAG CTAAGGGTCA CTACTAA
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| Protein sequence | MYKAFFGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG DTGGFVLLTG EVGTGKTTVS
RCLLNQLPEN TDTAFILNPS LTELELLATL CDELSIEYEK EPTLKQLTDL LSKYLLANHE
KGRNTVLIID EAQHLRAEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQQL LKRQELRQLA
QRITARYHLL PLTPEEVGLY VHHRLQVAGR HEPLFNTGAI KALHRYSGGI PRLINLLCER
ALMASYAKSK VPVDKKMVIS ASAEVLGEEI KQTNYLLPAG IAAAVGLSCV LGYLLLTKQQ
SAVTTPSAQV SPVVKPEVST EPVKANLENK LDASQRVLND AIANSRNIDT AYASILGLWG
KVPYLGLSAC QSAEQQGLSC FQQQGNWNSL TRLNFPAVVY LVDGQDEAFY GTVVSRSGEQ
LLLQLNEQQL WVDREWFNRH FSGTFELLWQ APDELPREIG KGSNPAQIQW LENSLAKIDN
TAPRLVSRFD IQLEEQLKRF QRKHGLRADA IAGSQTLVQL NLYLSAQGPR LMQAKGHY
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