Gene Swoo_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1159 
Symbol 
ID6115394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1493128 
End bp1493481 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content46% 
IMG OID641632643 
Productdihydroneopterin aldolase 
Protein accessionYP_001759547 
Protein GI170725521 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000272925 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0363413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGGG TATTAATCAG GCAGTTAAAA ATTGAAACCA TTATCGGGAT CTATGAGTGG 
GAAAAGCAGA TCCACCAGAC TCTATTGGTC GATCTTGATA TGGCTTGGGA TAACAAAATG
GCAGCGGCTA CCGATGATTA CCAGCATGCG CTCTGTTATG AAACGGTTTC TAACCGCTTA
ACTGCTTTGA TTACGCAGAA GCCTATTGAG CTTATTGAAA CCGTGGCTGA GATGATAGCA
AACTGCCTGT TGACTGAGTT TAATGTTCCT TGGGTTAAAG TGACCATTAT GAAGCCCGGG
GCGGTTCCAA CAGCTGCGGC TGTGGGTGTA GAGATAGAGC GAGGCCACGC TTAA
 
Protein sequence
MDRVLIRQLK IETIIGIYEW EKQIHQTLLV DLDMAWDNKM AAATDDYQHA LCYETVSNRL 
TALITQKPIE LIETVAEMIA NCLLTEFNVP WVKVTIMKPG AVPTAAAVGV EIERGHA