| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1156 |
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| Symbol | rpsU |
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| ID | 6115391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1490396 |
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| End bp | 1490611 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632640 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_001759544 |
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| Protein GI | 170725518 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000152947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0305894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAATAA TTAAAGTACG CGATAACGAA CCATTTGACG TAGCTCTACG TCGTTTTAAG
CGCTCTTGTG AGAAAGCTGG TATCTTAGCT GATGTTCGTG CTCGTGAGTT TTACGAAAAG
CCAACAACTG CACGTAAGCG TGCTAAAGCC GCTGCTGTTA AGCGTCTTGC TAAGAAACTT
TCACGCGAAA ACGCTCGTCG CGTACGTTTA TACTAA
|
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| Protein sequence | MPIIKVRDNE PFDVALRRFK RSCEKAGILA DVRAREFYEK PTTARKRAKA AAVKRLAKKL
SRENARRVRL Y
|
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| |