Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1150 |
Symbol | |
ID | 6115384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1481436 |
End bp | 1482338 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641632633 |
Product | fructokinase |
Protein accession | YP_001759538 |
Protein GI | 170725512 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.310813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAGAA TTGGCATCGA TTTAGGTGGT ACCAAAATTG AGTTAATTGC GTTAGATGCT AGTGGTGAAG AGCGCTTTCG TAAGCGAGTA CCCACACCAA GGCAATACCC ATCAACCTTG GATGCTATTG TTGAACTGGT CAATGAAGCT GAGCTTGTGA TAGGTGAGAA AGCAAGTATT GGCGTTGGGA TCCCTGGAAT CGTGTCTCCC TTTACTGGCT TGGTAAAAAA TGCCAACTCA ACCTGGATTA ATGGTCACCC CTTAGATGTT GATTTAGGTA AGCGGTTAGC ACGGAAAGTA AAGGTGGCGA ATGATGCCAA CTGCTTTGCC GTATCGGAAG CGGTAGATGG TGCGGCTAAA AACAGCGCAG TGGTGTTTGG GGTTATTATC GGTACTGGCT GCGGCGCAGG TATCGCGATT AATGGTCAAG TACACGCAGG TGGTAATGGC ATAGGTGGAG AGTGGGGCCA TAACCCGCTT CCATGGATGA CACCTGATGA ACACCACTCA ACTAGCTGTT TTTGTGGCAA TAGAGACTGT ATCGAAACCT TTATCTCAGG CACAGGGTTT GTCCGTGATT TTCGAGAGTC TGGTGGGGAA GCCGCTAGTG GCATTGAGAT AGCCCAGCTG ATGGAGCAGG GCGATGCATT GGCTACCCAA GCTTTTACGC GTTTTATCGA CAGACTTGCA CGCTCCTTAG CCCATGTCAT TAACGTACTT GACCCTGATG TCATCGTATT GGGCGGCGGC GTATCGAATA TCGATGCCAT CTACACTGAG CTACCTGCGG TGCTTCCCAA CTATGTGCTA GGTCGAGAGT GTGAAACCCC AGTGGTTAAG AATCTCTATG GTGCCTCATC CGGCGTTAGA GGCGCAGCCT GGTTATGGGG AAGAGATAGT TAA
|
Protein sequence | MFRIGIDLGG TKIELIALDA SGEERFRKRV PTPRQYPSTL DAIVELVNEA ELVIGEKASI GVGIPGIVSP FTGLVKNANS TWINGHPLDV DLGKRLARKV KVANDANCFA VSEAVDGAAK NSAVVFGVII GTGCGAGIAI NGQVHAGGNG IGGEWGHNPL PWMTPDEHHS TSCFCGNRDC IETFISGTGF VRDFRESGGE AASGIEIAQL MEQGDALATQ AFTRFIDRLA RSLAHVINVL DPDVIVLGGG VSNIDAIYTE LPAVLPNYVL GRECETPVVK NLYGASSGVR GAAWLWGRDS
|
| |