Gene Swoo_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1150 
Symbol 
ID6115384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1481436 
End bp1482338 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content49% 
IMG OID641632633 
Productfructokinase 
Protein accessionYP_001759538 
Protein GI170725512 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.310813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAA TTGGCATCGA TTTAGGTGGT ACCAAAATTG AGTTAATTGC GTTAGATGCT 
AGTGGTGAAG AGCGCTTTCG TAAGCGAGTA CCCACACCAA GGCAATACCC ATCAACCTTG
GATGCTATTG TTGAACTGGT CAATGAAGCT GAGCTTGTGA TAGGTGAGAA AGCAAGTATT
GGCGTTGGGA TCCCTGGAAT CGTGTCTCCC TTTACTGGCT TGGTAAAAAA TGCCAACTCA
ACCTGGATTA ATGGTCACCC CTTAGATGTT GATTTAGGTA AGCGGTTAGC ACGGAAAGTA
AAGGTGGCGA ATGATGCCAA CTGCTTTGCC GTATCGGAAG CGGTAGATGG TGCGGCTAAA
AACAGCGCAG TGGTGTTTGG GGTTATTATC GGTACTGGCT GCGGCGCAGG TATCGCGATT
AATGGTCAAG TACACGCAGG TGGTAATGGC ATAGGTGGAG AGTGGGGCCA TAACCCGCTT
CCATGGATGA CACCTGATGA ACACCACTCA ACTAGCTGTT TTTGTGGCAA TAGAGACTGT
ATCGAAACCT TTATCTCAGG CACAGGGTTT GTCCGTGATT TTCGAGAGTC TGGTGGGGAA
GCCGCTAGTG GCATTGAGAT AGCCCAGCTG ATGGAGCAGG GCGATGCATT GGCTACCCAA
GCTTTTACGC GTTTTATCGA CAGACTTGCA CGCTCCTTAG CCCATGTCAT TAACGTACTT
GACCCTGATG TCATCGTATT GGGCGGCGGC GTATCGAATA TCGATGCCAT CTACACTGAG
CTACCTGCGG TGCTTCCCAA CTATGTGCTA GGTCGAGAGT GTGAAACCCC AGTGGTTAAG
AATCTCTATG GTGCCTCATC CGGCGTTAGA GGCGCAGCCT GGTTATGGGG AAGAGATAGT
TAA
 
Protein sequence
MFRIGIDLGG TKIELIALDA SGEERFRKRV PTPRQYPSTL DAIVELVNEA ELVIGEKASI 
GVGIPGIVSP FTGLVKNANS TWINGHPLDV DLGKRLARKV KVANDANCFA VSEAVDGAAK
NSAVVFGVII GTGCGAGIAI NGQVHAGGNG IGGEWGHNPL PWMTPDEHHS TSCFCGNRDC
IETFISGTGF VRDFRESGGE AASGIEIAQL MEQGDALATQ AFTRFIDRLA RSLAHVINVL
DPDVIVLGGG VSNIDAIYTE LPAVLPNYVL GRECETPVVK NLYGASSGVR GAAWLWGRDS