| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1149 |
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| Symbol | |
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| ID | 6115383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1478805 |
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| End bp | 1481393 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632632 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001759537 |
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| Protein GI | 170725511 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.341986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.418597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGC TTGCATACAA ACGTTCGCTA CTTTCCATCA CGATACTAGC AATAACCATG
ACCAGTGGTT GCAGTAAAGA GGTAGCACCT CAAAAGGAAG ATCTAGAGCC TAAAGAGGGC
CTCCAAAGCT ATGCTTTTGG CGGTAAGGCA GTGGATATCA ATATCTGGCC AGCACTTGAG
CTCCCCCACC GTAATAGCAG TGAGGTTGAA GGTAAGGTCG CTGAGATTTT AGCGGGGATG
ACTTTAGAGC AAAAAGTAGC GCAGATGATC CAGCCTGAGA TCCGCGATAT TAGTGTCGAA
GATATGCGTC AATATGGCTT TGGCTCCTAC CTAAATGGTG GTGGGGCATA CCCCAACAAT
GATAAGCATG CACTCCCCTC CGATTGGATT GCTCTTGCTG AGAATATGTA TCAAGCATCG
GTTGATGCAA GCCTTGATGG GTCAAGCATT CCAACCATGT GGGGAACCGA TGCCGTACAC
GGACACAATA ATGTGATTGG GGCGACTCTG TTTCCTCACA ATATTGGCCT AGGCGCTGCT
AACAATCCTG AGCTTATCCG TGAGGTTGCT GCTATTACCG CAAAAGAGGT GATGGTGACA
GGGATAGATT GGGTGTTTGC CCCAACCGTT GCTGTTGTAC GTGATGACAG GTGGGGGCGA
ACCTATGAGG GGTACTCTGA AGATCCTGAG ATTGTACTGG CTTACTCTGC CGCAATAGTT
GAAGGTTTAC AAGGCGAGGC CAGTGGTGAT GAATTTCTCT CATCTGAGCA CGTAATCTCA
ACGGTTAAGC ATTTTCTCGG TGATGGCGGT ACTGAAAAGG GCGTTGATCA GGGAGATAAC
TTGATTGATG AACAGGGGCT GTTTGATCTT CATGGACAGG GTTATGTGGG AGGCTTGGTC
GCTGGCTCGC AAAGTGTGAT GGCCTCGTTC AATAGCTGGC ACGGGGTAAA AAACCACGGT
AATGAGTATC TGCTAACCGA TGTTCTTAAA ACTCGAATGG GTTTCGATGG TTTCGTTGTG
GGAGACTGGA ACGGTCACGG TCAGGTGTTA GGTTGTACAA ATGAGACTTG TCCACAAGCA
GTCAATGCTG GACTTGATAT GTTTATGGTG CCCACTGATG CGTGGAAACC TCTGTATGAA
AACACCATCG CAGAGGTGAG AAGTGGCCAG ATATCTCAAG CGAGGATCGA TGATGCGGTG
AGCCGTATCT TACGTGTCAA AGTGCGTGCT GGATTATTTA ATAAACCTAG CCCTGCAAAT
CGCCCATTAT CTGGAAAGCT TGAGCTCATT GGTCATGAAA GTCACCGCCA AGTTGCCAAG
CAAGCGGTGA GGGAATCTTT GGTGCTGTTG AAAAATGGCC ATAATACCCT ACCTCTCTCC
CCTAAGATGA GAGTACTGGT TGCGGGAGAT GGTGCAAATA ACATAGGTAA ACAGTCTGGT
GGCTGGAGTA TTACTTGGCA GGGAACGGAC AATCAAAATA GTGACTTTCC AGGTGCAAGC
TCTATCTATG ATGGGATAAA AGAGACCGTA CTTAAAGCGG GTGGCACTGC AACACTGGAT
ATTGCTGGCC AGTATAGCGA GGAAAACCGA CCCGATGTGG CGATTGTCGT CTTTGGTGAG
GAGCCCTACG CCGAAGGTAA TGGTGATATT GATAACTTAG AGTATCAAAG GGGTGATAAA
AGAGATCTGG CACTACTGAA AAGACTTAAA AGTGAAGGGA TCCCTGTTGT TTCGATTTTT
ATTACCGGAC GTCCTTTATG GGTTAATCCA GAACTCAATG CATCGGACTC CTTTGTGGTA
GCTTGGCTTC CAGGAAGTGA AGGTGATGCG GTCGCTGACG TTCTGTTCTC ATCCTCTGAC
GGTCAAGTTG TCAATGATAT GACAGGAAAG CTCTCTTTCT CTTGGCCATC AACGCCTATG
CAGGCTGTGG TAAATCGCTT TGATAAGGAT TACCAACCTC TGTTTAAGTA TGGTCATGGT
TTATCTTACG CTGATAAAGG TGACTCAGCC TTAGTATCAG AGATTAAGCC TGTCGACTCA
GATATTTTAC GCCCCTTAGT AATACTTAAA AATGCCGTGA AGGCGCCTTG GCGATTATCC
ATAGGGACAA GCGCTGATCA AGACTTGATT AACACCAGTT TACAAACCAG TGGTCCTGTG
GTGATGCGAA CCATTGATAG GGTGGTGCAG GAGGACGCAC GTAAGTTTAA CTTAGATGGT
AAAGAGCAGG GCGTTATCCG TTTTGGGGCA AACTTTACTC GAGACTTACG TGCATATGAG
CAGGGAAATA CAGCGGTTTC GTTTGATATT AAGCTTGATG AATTCACCCC GCAGAGCACA
CAACTATCAA TGGTTTGTGA CAAGGCCTGT GGAGTCCCAG TGGCGCTAGA AGAGAAATTT
AAGCAGATCG CGGGCACGGG GTGGCAAACA ATATCGGTGG ATCTTGCCTG CTTTGAGTTA
AGCAGTGATC AGCTTTCAAA AGTTCAAAGC CCATTTCTGT TCTCCTCGAA GGCGAAAATT
ACCATGAGTC TATCGAATAT CTATTGGCTC CCTGATTATC AAGGTCAGCC AGATGTCTCA
TGTCATTAA
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| Protein sequence | MSVLAYKRSL LSITILAITM TSGCSKEVAP QKEDLEPKEG LQSYAFGGKA VDINIWPALE
LPHRNSSEVE GKVAEILAGM TLEQKVAQMI QPEIRDISVE DMRQYGFGSY LNGGGAYPNN
DKHALPSDWI ALAENMYQAS VDASLDGSSI PTMWGTDAVH GHNNVIGATL FPHNIGLGAA
NNPELIREVA AITAKEVMVT GIDWVFAPTV AVVRDDRWGR TYEGYSEDPE IVLAYSAAIV
EGLQGEASGD EFLSSEHVIS TVKHFLGDGG TEKGVDQGDN LIDEQGLFDL HGQGYVGGLV
AGSQSVMASF NSWHGVKNHG NEYLLTDVLK TRMGFDGFVV GDWNGHGQVL GCTNETCPQA
VNAGLDMFMV PTDAWKPLYE NTIAEVRSGQ ISQARIDDAV SRILRVKVRA GLFNKPSPAN
RPLSGKLELI GHESHRQVAK QAVRESLVLL KNGHNTLPLS PKMRVLVAGD GANNIGKQSG
GWSITWQGTD NQNSDFPGAS SIYDGIKETV LKAGGTATLD IAGQYSEENR PDVAIVVFGE
EPYAEGNGDI DNLEYQRGDK RDLALLKRLK SEGIPVVSIF ITGRPLWVNP ELNASDSFVV
AWLPGSEGDA VADVLFSSSD GQVVNDMTGK LSFSWPSTPM QAVVNRFDKD YQPLFKYGHG
LSYADKGDSA LVSEIKPVDS DILRPLVILK NAVKAPWRLS IGTSADQDLI NTSLQTSGPV
VMRTIDRVVQ EDARKFNLDG KEQGVIRFGA NFTRDLRAYE QGNTAVSFDI KLDEFTPQST
QLSMVCDKAC GVPVALEEKF KQIAGTGWQT ISVDLACFEL SSDQLSKVQS PFLFSSKAKI
TMSLSNIYWL PDYQGQPDVS CH
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