| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1146 |
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| Symbol | |
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| ID | 6115380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1474448 |
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| End bp | 1475776 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632629 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001759534 |
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| Protein GI | 170725508 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAGTG TTAAAGAGAA GATTGCATAT GGATTAGGAG ATACTGCCAG TAATATCGTA
TTTCAGACGG TCATGTTGTT TCTAACGTTT TTCTATACTG ATATTTTTGG GATCCCTCCC
GCCTTTGTCG GTACCATGTT CTTAGCCGTG CGTCTTATAG ATGCTATTAC CGATCCCTTA
ATGGGGGCGA TGACCGACAG AACCCAAACA CGCTATGGAA AATTTAGGCC CTATCTGCTC
TGGTTTGCCC TCCCCTTTGG ACTCTTCAGT GTCTTGGCTT TTACTACGCC AGACCTCTCT
GAGCAGGGAA AGATGATATA CGCCTTTGTC ACTTACACTG CGTTGATGAT GGTTTATACC
GCAATTAATA TCCCCTACTG CGCATTAGGT GGGGTACTCA CCTCCGATCC TAAAGAGCGT
GTTTCAGTGC AATCCTACCG CTTCGTATTT GCGATGTTAG GAGGGCTATT AGTCTCGGGA
CTGACCTTAC CTTTGGTTGA GTTTCTCGGT GAGGGAGATC AAGCTAAAGG CTATCAACTC
ACTATCACTG CCATGAGTAT TTTAGGCGTG GCGATGTTTT TAATCTGCTT TTGGAATACT
AAAGAGAGGC TCACTCCTTC TCAGCCCCAC CAATCAAGCT TTAAGCAAGA TGTCGGTTAT
TTGGTGAAGA ATGATCAATG GCGCATCTTA TGTATCGCAT CAGTATGTCT GCTCTCAGGT
ATGGTGCTAA AAACTAGCCT AGCCATCTAC TATGTAAAAT ACTTCCTGCA GATGCCGGAT
AAGATAACTC TTTTCATCAC ATTGGGTATG GTAGGTAATA TTTTTGGTTG CATGTTAGCT
CAGCCATTGG CGAAACGCGT CTGTAAAGTC AACGCGTACA TCTCACTGCA ATTGATTGCG
GCGGCCTTAT GTATTGCCAC CTATTTTGTC CCGAAGGAGC AGGTGGAACT CGCTTTCGCC
ATGTTTATCC TATGGGGATT TGCGTTCAAT ATGGCCACAC CACTGTTGTG GGCAAAGATG
GCGGATACGG TTGATTACGG CCAGTATAAA GATGGGGTTA GGCTCACCGG CATTATCTAC
TCCTCAATTA TTTTCTTTAT CAAACTTGGC GTAGCCATAG GCGGAGCAGC AGCTGGCTGG
TTACTCTCAG GTTACGGTTA CCAGGCAGAT GTAGAACAAA CACCACAAAC CCTAAATGGT
ATTTTACTCT CTTTCACCGT CTACCCAGCA GTAGGTTCTA TTTTAGTTGC CATCGTTATG
CGCAAATACA CCCTAAAAAA CAGCAAAGTT GATGAGATCC ATCTCGAATT AAATAGAATG
GAAAAATAA
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| Protein sequence | MVSVKEKIAY GLGDTASNIV FQTVMLFLTF FYTDIFGIPP AFVGTMFLAV RLIDAITDPL
MGAMTDRTQT RYGKFRPYLL WFALPFGLFS VLAFTTPDLS EQGKMIYAFV TYTALMMVYT
AINIPYCALG GVLTSDPKER VSVQSYRFVF AMLGGLLVSG LTLPLVEFLG EGDQAKGYQL
TITAMSILGV AMFLICFWNT KERLTPSQPH QSSFKQDVGY LVKNDQWRIL CIASVCLLSG
MVLKTSLAIY YVKYFLQMPD KITLFITLGM VGNIFGCMLA QPLAKRVCKV NAYISLQLIA
AALCIATYFV PKEQVELAFA MFILWGFAFN MATPLLWAKM ADTVDYGQYK DGVRLTGIIY
SSIIFFIKLG VAIGGAAAGW LLSGYGYQAD VEQTPQTLNG ILLSFTVYPA VGSILVAIVM
RKYTLKNSKV DEIHLELNRM EK
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