Gene Swoo_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1142 
Symbol 
ID6115376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1467525 
End bp1468247 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content45% 
IMG OID641632625 
ProductSapC family protein 
Protein accessionYP_001759530 
Protein GI170725504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC ATGTACTACT TAATAGCCTA GAGCATAAAG ATCTTAAAGT GATAACCGAA 
CGCTCAAAGG AGCTCGGGGA CAATATGTGG TACAGCGTGA CCTTTCCCGC AGAGTTTCGC
AGTATTCAGG CAAGCTACCC TATCTTTTTT CACAAAGATG GCGCTACTGG TCAGTTCTTT
TCTGTCGCCC TATTTGGCTT TCAGCACAAT GAGAACCTCT TTTTAAATGA TGAGGGTTGG
CAAGCATCCT ACATCCCTTT GTCTGTCAGA CGTCAGCCTT TTCTCATTGG ACAGCAAACA
GTACGTGAAG ATGGTATTGA GCAGCAACAA AGGGTAATTC ATGTCGACAT GGAGAGTCCT
AGAGTTTCAG ATACCGAAGG GGAAGCTCTA TTTCACCCTT TTGGTGGTAA TACAGATTTT
CTCGATGCCG CCGCAGAGAT GCTAGAAACA ATCCACTACG GGCTGCAAGA CAGTCAACGC
TTTATCGATA CCTTGATTGA ACATCAGCTG CTTGAGTCAT TCACCTTAGA TATCACCCTC
GACAATGGGG AGCAGAAGCA GATGATAGGC TTCTATACCA TCAATGAGGA GATACTGGCT
GGCCTTGCGC CTGAAGTGTT AACGCAACTG CATAAGACTG GACACCTACA AGCCATCTAT
ATGGCAATGG CATCGCAATC AAAGATCCGC GATCTGTTAA CGTTAAAAAA TGCAAAACAA
TAA
 
Protein sequence
MSKHVLLNSL EHKDLKVITE RSKELGDNMW YSVTFPAEFR SIQASYPIFF HKDGATGQFF 
SVALFGFQHN ENLFLNDEGW QASYIPLSVR RQPFLIGQQT VREDGIEQQQ RVIHVDMESP
RVSDTEGEAL FHPFGGNTDF LDAAAEMLET IHYGLQDSQR FIDTLIEHQL LESFTLDITL
DNGEQKQMIG FYTINEEILA GLAPEVLTQL HKTGHLQAIY MAMASQSKIR DLLTLKNAKQ